Microbiology and Molecular Biology Reviews, March 1999, p. 230-262, Vol. 63, No. 1
Department of Microbiology and
Guelph-Waterloo Centre for Graduate Work in Chemistry, University
of Guelph, Guelph, Ontario, Canada N1G 2W1
1092-2172/99/$04.00+0
Copyright © 1999, American Society for Microbiology. All rights reserved.
Osmosensing by Bacteria: Signals and
Membrane-Based Sensors
SUMMARY
OSMOSENSING
SOLVENTS AND THEIR INTERACTIONS WITH BIOMOLECULES
Solvent Properties Pertinent to Osmosensing
Solvent-Macromolecule Interactions
Preferential interaction.
Hydration forces.
Pressure effects on the specificity of ligand-receptor
interactions.
Crowding and confinement.
Solvent-Membrane Interactions
Solvent effects on membrane structure.
Biomembrane permeability.
Mechanical properties of membranes.
TIMELINE OF OSMOSENSING
Phases of the Osmotic Stress Response
Cell Structure
Passive structural responses of bacteria to osmolality
changes.
Cell surface modifications and osmosensing.
Osmotic shifts, cytoplasmic composition, and nucleoid
organization.
Energy Metabolism
Osmotic upshifts.
Osmotic downshifts.
Adjustment of Cytoplasmic Solvent Composition
Cosolvent accumulation: absence of osmoprotectants.
Cosolvent accumulation: presence of osmoprotectants.
Cosolvent efflux.
Osmoregulation, Turgor Pressure, Cell Growth, and Cell
Division
Structural responses of metabolically active bacteria to
osmotic shifts.
CYTOPLASMIC MEMBRANE-BASED OSMOSENSORS
K+ Transporters of E. coli
Transporter Trk.
Transporter Kdp.
Sensor kinase KdpD.
Osmoprotectant Transporters
Glycine betaine uptake by L. monocytogenes.
Transporter BetP of C. glutamicum.
Transporter ProP of E. coli.
Mechanosensitive Channel MscL of E. coli
CONCLUSION
APPENDIX
ACKNOWLEDGMENTS
REFERENCES
SUMMARY
|
|
|---|
Bacteria can survive dramatic osmotic shifts. Osmoregulatory responses mitigate the passive adjustments in cell structure and the growth inhibition that may ensue. The levels of certain cytoplasmic solutes rise and fall in response to increases and decreases, respectively, in extracellular osmolality. Certain organic compounds are favored over ions as osmoregulatory solutes, although K+ fluxes are intrinsic to the osmoregulatory response for at least some organisms. Osmosensors must undergo transitions between "off" and "on" conformations in response to changes in extracellular water activity (direct osmosensing) or resulting changes in cell structure (indirect osmosensing). Those located in the cytoplasmic membranes and nucleoids of bacteria are positioned for indirect osmosensing. Cytoplasmic membrane-based osmosensors may detect changes in the periplasmic and/or cytoplasmic solvent by experiencing changes in preferential interactions with particular solvent constituents, cosolvent-induced hydration changes, and/or macromolecular crowding. Alternatively, the membrane may act as an antenna and osmosensors may detect changes in membrane structure. Cosolvents may modulate intrinsic biomembrane strain and/or topologically closed membrane systems may experience changes in mechanical strain in response to imposed osmotic shifts. The osmosensory mechanisms controlling membrane-based K+ transporters, transcriptional regulators, osmoprotectant transporters, and mechanosensitive channels intrinsic to the cytoplasmic membrane of Escherichia coli are under intensive investigation. The osmoprotectant transporter ProP and channel MscL act as osmosensors after purification and reconstitution in proteoliposomes. Evidence that sensor kinase KdpD receives multiple sensory inputs is consistent with the effects of K+ fluxes on nucleoid structure, cellular energetics, cytoplasmic ionic strength, and ion composition as well as on cytoplasmic osmolality. Thus, osmoregulatory responses accommodate and exploit the effects of individual cosolvents on cell structure and function as well as the collective contribution of cosolvents to intracellular osmolality.
OSMOSENSING
|
|
|---|
As inhabitants of natural and
artificial aqueous environments, bacteria survive dramatic changes in
extracellular osmolality (for definitions of terms used in this review,
see the glossary in Table 1). For
example, soil bacteria survive periods of low and high rainfall,
uropathogens survive urine concentration and dilution, and industrial
organisms tolerate concentrated nutrient solutions as well as the
extracellular accumulation of metabolic products. Bacteria respond both
passively and actively to changes in the osmolality of their
environment (Fig. 1 provides a summary of this phenomenon as it occurs
in Escherichia coli).
|
Since the water permeability of the cytoplasmic membrane is high, imposed imbalances between turgor pressure and the osmolality gradient across the bacterial cell wall are short in duration. Changes in cell structure, organization, and composition that result from transmembrane water flux (Fig. 1, left column) trigger and are modulated by physiological responses (Fig. 1, right column). Bacteria respond to osmotic upshifts in three overlapping phases: dehydration (loss of some cell water) (phase I), adjustment of cytoplasmic solvent composition and rehydration (phase II), and cellular remodeling (phase III). Responses to osmotic downshifts are not yet well characterized, but they are also likely to proceed in three phases: water uptake (phase I), extrusion of water and cosolvents (phase II), and cytoplasmic cosolvent reaccumulation and cellular remodeling (phase III). Many of the cellular responses triggered by osmotic stimuli occur in parallel. Limited experimental evidence for sequential osmoregulatory processes (discussed below) offers insights into osmosensory mechanisms.
|
Modulation of cytoplasmic solvent composition is the only response that is known to reverse the growth-inhibitory effects of osmotic shifts on bacteria. The following principles govern this process as it occurs in diverse bacteria, both gram positive and gram negative. (i) The concentrations of certain cytoplasmic solutes increase and decrease in response to osmotic up- and downshifts, respectively. (ii) There is a hierarchy of preference among the solutes that accumulate in response to an osmotic upshift. Particular zwitterionic organic cosolvents such as ectoine and glycine betaine are selected for this role over inorganic solutes such as K+. (iii) Osmoregulation of uptake, efflux, biosynthesis, and/or catabolism is required to modulate the cytoplasmic levels of these osmoregulatory solutes.
The genes and enzymes responsible for modulation of osmoregulatory solute levels have been identified in diverse bacteria. The mechanisms by which bacteria sense osmotic shifts (osmosensory mechanisms) and the basis for osmoregulatory solute selection are still poorly defined, however.
Chemosensors exploit the specificity of ligand-receptor interactions to detect the biochemistry of cellular environments, including both changes in nutrient supplies and signals with biological origins (Fig. 2). An osmosensor is a device that detects changes in extracellular water activity (direct osmosensing) or the resulting changes in cell structure (indirect osmosensing). In contrast to chemosensory mechanisms, osmosensory mechanisms cannot be based on stereospecific ligand-receptor interactions that occur at specific sites in receptor molecules. Instead, osmosensors are likely to be macromolecules that undergo changes in conformation and/or oligomerization in response to solvent changes or ensuing mechanical stimuli (Fig. 2). Our current knowledge suggests that osmosensors are located in the cytoplasmic membranes and nucleoids of bacteria. This review focuses on membrane-based osmosensors since they elicit primary osmoregulatory responses. In addition, current knowledge of the osmoregulation of transcription in bacteria has been reviewed whereas the basis for membrane-based osmosensing has not. The goals of this review are to define the properties of solvent-macromolecule and solvent-membrane interactions pertinent to osmosensing, to identify putative osmosensors and the changes that they detect, and to review our current understanding of cytoplasmic membrane-based osmosensory mechanisms in bacteria. This review is intended to stimulate broadly based research on osmosensing. Efforts have therefore been made to express microbiological, biochemical, and biophysical concepts in terms accessible to both specialists and nonspecialists. Readers who prefer textual explanations are therefore asked to accommodate the mathematical expressions preferred by those interested in the biophysical basis for osmosensing. This review also builds upon concepts developed by many other authors (2, 7, 25, 47, 74, 220, 228, 229, 256). Physiological responses to osmolality changes, to cooling-freezing, and to desiccation are related (44, 55, 124, 156). Only responses to osmolality changes are considered here, however. In addition, this review does not encompass the modifications to macromolecular structure that render organisms of the salt-in-cytoplasm type obligately halophilic (74).
|
SOLVENTS AND THEIR INTERACTIONS WITH BIOMOLECULES
|
|
|---|
Solvent Properties Pertinent to Osmosensing
For the purpose of this review, the chemical potential of water can be expressed as
|
(1) |
w is the
partial molar volume of water, and P is the pressure.
Water and its solutes can be characterized by their activities (ai), where
|
(2) |
i and xi are the
activity coefficient and the mole fraction of the ith
constituent, respectively, and O < ai < 1. In a physicochemically ideal system, the solvent activity approaches 1 and the solute concentrations (expressed as mole fractions or as the
more familiar molar units), which approach zero, can be used as
effective proxies for their activities. Experimental systems are often
designed to approximate ideality, so that simplifying assumptions can
be made about the resulting chemical and physical phenomena. Although
some laboratory media and some natural microbial environments can be
described as ideal solutions, many are nonideal. The aqueous
compartments within microorganisms are certainly nonideal. Nonideality
has important consequences for osmosensing (see
"Solvent-macromolecule interactions").
The ionic strength and osmotic pressure of the solvent arise through
collective contributions of ionic solutes and of all solutes,
respectively. Solutes that are present at high concentrations have the
greatest effects on osmolality and (if they are ionic) ionic strength.
The osmotic pressure of an aqueous solution (
) is defined as
|
(3) |
|
(4) |
|
(5) |
Solvent-Macromolecule Interactions
Biologically relevant solvents, whether extracellular or intracellular, include both water and cosolvents. Cosolvents are solutes that significantly influence the behavior of water as a solvent (see "Solvent properties pertinent to osmosensing"). The term "cosolvent" is introduced here to emphasize that every solute molecule makes some contribution to solvent behavior while, more or less independently, playing a specific physiological role. Important solvent characteristics include cosolvent composition, ionic strength, osmotic pressure (or osmolality), and pH (see "Solvent properties pertinent to osmosensing"). Each cosolvent contributes, as part of the collective of cosolvents, to the osmolality of the solution. In addition, each cosolvent has particular effects on water, on its interactions with biomolecules, and hence on cellular functions. Both the osmolality and individual cosolvent effects are relevant to osmoregulatory mechanisms and their experimental study.
Diverse cosolvents are present outside and inside bacteria. NaCl and sugars (or other polyols) are the most prevalent and abundant extracellular cosolvents in natural environments. K+, organic anions, compatible solutes, proteins, and nucleic acids are the predominant intracellular cosolvents (28, 29, 74, 257, 304). The intracellular solvent of most bacteria is thus differentiated from the extracellular solvent by including a restricted array of low-molecular-weight cosolvents and a high concentration of macromolecular cosolvents. To understand osmosensing, it is necessary to deduce both the solvent changes to which osmosensors are actually exposed in vivo and the mechanisms by which those solvent changes can trigger changes in osmosensor conformation. Osmosensors located in the cytoplasmic membrane or nucleoid are exposed to the constrained solvent environments of the cytoplasm, membrane, and/or periplasm, not to the extracellular aqueous medium.
Effects of cosolvents on the behavior of water at interfaces (and their
effects on proteins) have been described, systematically but
empirically, in terms of the Hofmeister effect (41). Both ionic and nonionic cosolvents can be characterized in this way as
kosmotropic (water structure making, e.g. phosphate, ammonium, sucrose,
and glycerol), close to neutral (e.g., Na+ and
Cl
), or chaotropic (water structure breaking, e.g.,
SCN
and urea). For example, kosmotropes and chaotropes
tend to stabilize and destabilize native protein conformations,
respectively (for a further discussion, see below). Effects of
kosmotropes and chaotropes on protein function may be additive or
mutually compensatory (see, e.g., references 292 and
308).
Efforts by biochemists and biophysicists to systematically describe and explain water-cosolvent-macromolecule-solid-matrix interactions now offer additional perspectives and tools to students of osmoregulation (Fig. 3). Included are studies of (i) very low affinity ligand-receptor interactions and the impacts of diverse cosolvents on macromolecular stability, solubility, and assembly explained in terms of preferential exclusion of certain solvent constituents from macromolecular surfaces (275); (ii) the significance of hydration changes, probed by varying the osmotic pressure, for macromolecular interactions and functions (209); and (iii) the impacts of crowding and confinement on the structures and interactions of macromolecules (182, 297). Each rests on the concept that "the local environment will influence reactions taking place in a biological medium when reactants, transition state complexes, and products interact unequally with background species" (311). In the context of osmosensing, the reactants and products would be the forms ("off" and "on") of an osmosensor and the background species constituting the local environment would include water, cosolvents, and structural elements.
Preferential interaction. Some interactions among water, cosolvents, and osmosensors may be more appropriately considered in terms of preferential binding or exchange than in terms of classical binding theory. The latter describes the fractional occupancy of a specific receptor site(s) on a macromolecule by one or more ligands. This occupancy may vary from 0 (no binding) to the number of sites, which is usually small. In terms of preferential binding or exchange, the reference state is a macromolecule in pure water with all exposed surface sites hydrated (no sites occupied by cosolvent). A gradual exchange of water for cosolvent occurs as the cosolvent is added to the system. At any cosolvent concentration, the fractional occupancy of surface sites by cosolvent exceeds, matches, or falls short of the proportion (mole fraction) of cosolvent molecules in bulk solution if the surface sites prefer cosolvent over water, show no preference, or prefer water over cosolvent, respectively. This situation differs substantially from that treated by classical binding theory. Each solvent-macromolecule interaction is weak, but the number of sites involved is large and hence the potential impact of solvent-cosolvent exchange on macromolecular structure and function is also large. For example, it has been estimated that lysozyme offers a total of 266 surface sites for solvent and/or cosolvent occupancy (276). In addition, the global behavior of the macromolecule-solvent system is an average over weak interactions among macromolecule, cosolvent, and water at a large number of nonidentical surface sites.
The effects of various organic cosolvents on macromolecular solubility, conformation, and assembly can be described in terms of such preferential interactions (275, 276). A correlation is observed between cosolvent exclusion from protein surfaces and stabilization of native protein conformations and assemblies (which often have smaller surface areas exposed to solvent than denatured forms do) (Fig. 3). Steric restrictions on approach to the macromolecular surface by cosolvent molecules (as opposed to the smaller water molecules) and a thermodynamic preference of some cosolvent molecules for the bulk solvent over the solvent-protein interface are both believed to contribute to this cosolvent behavior. The protein-stabilizing effects of some compatible solutes have been described in these terms (248, 292, 308). It has been emphasized, however, that stabilization does not require preferential exclusion of the cosolvent from macromolecular surfaces. Stabilization can also be achieved if there is less preferential binding of the cosolvent to the denatured macromolecule than to the native macromolecule (as was shown for trehalose by Xie and Timasheff [301]). These observations indicate that the conformations and associations of macromolecules may be sensitive to the concentrations of cosolvents, but they also underscore the complex dependence of such phenomena on the chemical nature of cosolvent-macromolecule interactions, not on solution osmolality per se.
|
Hydration forces. Osmotic pressure has been used as a tool to probe the biological significance of macromolecular hydration, i.e., of "hydration forces." For example, the addition of osmotically active, polymeric cosolvent (e.g., polyethylene glycol [PEG]) to the surrounding medium can suppress ion channel opening and alter both KD and KM for the interaction of glucose with hexokinase (209). These data are interpreted as showing that the entry of cosolvent molecules to macromolecule-associated solvent pools is restricted and that solvent compartments which differ in osmolality are thus created. Thus, macromolecules may adjust to their solvent environments by assuming states that balance the (unfavorable) exclusion of cosolvent from inaccessible solvent pools against the (unfavorable) juxtaposition of macromolecular constituents. For example, withdrawal of solvent from intramolecular pools of low osmolality may force macromolecules to adopt different (and less energetically favorable) conformations than are assumed to be present in the absence of cosolvent (Fig. 3).
For hexokinase, this adjustment appears to be related to closure of a solvent-filled protein cleft containing the active site, although more generalized dehydration of the enzyme may also be involved. As would be anticipated for a purely osmotic effect, the number of water molecules implicated in this transition depends on the size of the cosolvent molecules used to impose osmotic stress. The difference in the number of PEG-accessible water molecules between the glucose-associated and glucose-free hexokinase conformations varies from 50 to 326 as the molecular weight of PEG increases from 300 to 1,000. It then remains constant as the molecular weight of PEG increases further to 10,000 (232). Thus, a larger quantity of hexokinase-associated water is inaccessible to high-molecular-weight than to low-molecular-weight PEG. These observations suggest that protein form and function can respond on an osmotic basis to certain cosolvents, including some that are similar in molecular weight and concentration to those which impose osmotic stress or serve as compatible solutes in nature.Pressure effects on the specificity of ligand-receptor interactions. Both osmotic and hydrostatic pressures have been used to perturb DNA-protein interactions (235). Stresses imposed with osmotic and hydrostatic pressures are fundamentally different; osmotic stress causes water molecules to be transferred from cosolvent-inaccessible to cosolvent-accessible regions around or within macromolecules, whereas hydrostatic pressure changes the weight density of the entire system. For some restriction endonucleases, DNA recognition sequence specificity changed as osmotic pressure was increased by the addition of diverse, low-molecular-weight cosolvents including sucrose, glycerol, 2-propanol, and N-methylformamide (0 to 3 osmolal, but with significant effect at 1 osmolal) (see, e.g., reference 234). These effects were reversed by elevated hydrostatic pressure (up to 500 atm). They were interpreted as indicating differential involvement of water at the enzyme-DNA interface for different DNA sequences. Hydration has also been recognized as playing a critical role in carbohydrate-protein interactions (152). Such behavior differs fundamentally from that described by preferential binding or exchange theory, however. It involves small numbers of water molecules that mediate high-affinity enzyme-substrate recognition at specific enzyme and substrate sites.
Crowding and confinement. Considerations of macromolecular crowding and confinement may also be used to explain "background" effects on macromolecular structures and interactions (182, 311). They define the collective impact of macromolecules, whether soluble or present as structural elements, on cellular processes. Garner and Burg (77) have reviewed these concepts from a physiological perspective. The term "crowding" refers to effects of high collective volume occupancy by macromolecules on the structures and functions of individual macromolecular species with which they interact only weakly and nonspecifically. Such effects may be biologically significant since macromolecules occupy as much as 50% of the cytoplasmic volume. The term "confinement" refers to effects of entrapment within a subcellular matrix on macromolecular function.
Consideration of crowding and confinement effects on biological processes in terms of solution nonideality yields predictions that are supported by experimental evidence. (i) Under conditions of crowding comparable to those found in vivo, the values assumed by macromolecular association constants may be dominated by crowding effects and may exceed the corresponding values for dilute solution by up to several orders of magnitude. (ii) Compact or globular macromolecular conformations or assemblies are favored more in crowded than in dilute solutions (Fig. 3). (iii) For a given degree of crowding, effects on associations between macromolecules are expected to be much greater than effects on association of small molecules with macromolecules. (iv) Both crowding and confinement tend to enhance macromolecular associations
unlike crowding, confinement may favor the formation of
extended (linear or discoid) rather than globular aggregates. Such
considerations have led to the proposal that (some) animal cells may
regulate macromolecular crowding rather than cell volume
(183). This proposal rests on the concept that
physiologically relevant changes in extracellular water activity,
effected by modulating the extracellular concentrations of diverse
cosolvents, may be translated into changes in cytoplasmic crowding or
confinement, thereby avoiding the complication of specific
cosolvent-osmosensor interactions.
These background effects on macromolecular structures and interactions
are not mutually exclusive, and this list is not necessarily complete.
For example, phenomena other than hydration have been proposed as
origins for the mutual repulsion of macromolecular surfaces in aqueous
solution (106). It has been argued that small cosolvent
molecules may exert their effects on protein solubility, stability, and
function through excluded volume rather than through osmotic or
preferential binding effects (297). It has been proposed that water within enzyme active sites, ligand binding sites of receptors, and ion channels, like that within polymeric matrices, differs from bulk water in density and hence in its behavior as a
solvent (295, 296). Resolution of these overlapping and/or conflicting interpretations is not the objective of this review. Rather, these concepts are useful to students of osmoregulation because
they contribute to our understanding of solvent effects on cell
structure and function and because they suggest potential osmosensory
mechanisms (Table 2).
|
Solvent-Membrane Interactions
The principles outlined above apply to biomembrane constituents, proteins, phospholipids, and polysaccharides, as well as to other macromolecules. Solvent effects on the assembled membrane warrant particular attention in the context of osmosensing because biomembranes constitute the semipermeable barriers which define biologically relevant osmotic compartments and some osmosensors are located within biomembranes. When an osmotic shift is imposed on a vesicular membrane system (a cell, a biomembrane vesicle, or a liposome), membrane perturbations with multiple origins occur. The following discussion is designed to enumerate these effects, indicate which may be detected by osmosensors, and provide references to pertinent experimental approaches.
Solvent effects on membrane structure.
Biophysicists
and biochemists have long been fascinated and puzzled by the diversity
and complex phase behavior of membrane phospholipids. The net charge,
hydrogen-bonding capacity, and hydration of each head group, the length
and unsaturation of each acyl chain, and the resulting overall shape of
each phospholipid molecule all contribute to the phospholipid-solvent
interactions which determine phase behavior in aqueous phospholipid
dispersions (57, 60, 78, 85, 155). Each phospholipid (and
each phospholipid mixture) has a particular propensity to form the
lamellar (L) phase characteristic of biological membranes versus
alternative arrangements, including the nonlamellar hexagonal
(HI or HII) or cubic phases. Phospholipid phase
transitions, for example, the transitions from gel (L
)
to liquid crystalline (L
) lamellar phases and from the
lamellar phase to the hexagonal phase, are characterized by phase
transition temperatures (for these examples, TM
and TH, respectively). Phospholipid phase
behavior (often indicated by phase transition temperatures) is also
influenced by amphiphiles which insert among phospholipid molecules
(e.g., alcohols, fatty acids, detergents, anaesthetics, and peptides) and by such solvent properties as pH, ionic strength, and cosolvent composition.
|
Biomembrane permeability.
For small deviations from
equilibrium, the net rate of volume flux across a membrane in response
to a hydrostatic or osmotic driving force can be described in terms of
an osmotic permeability coefficient (Pf
[centimeters per second]) characteristic of the membrane and a
reflection coefficient (
[dimensionless]) characteristic of the
membrane and the cosolvent used to impose the osmotic gradient (71, 200). The flow of volume across a membrane separating compartment 1 from compartment 2 can be described as
|
(6) |
w is the partial molar volume of water, R is the gas constant,
T is the temperature (Kelvin), P1 and
P2 are the hydrostatic pressures (atmospheres)
in compartments 1 and 2, respectively,
i
(0 <
i < 1) describes the relative
rates at which the ith cosolvent and water cross the
membrane (via all available pathways) and Osmi1 and Osmi2 are the osmolalities due to the
ith cosolvent in compartments 1 and 2, respectively. The
reflection coefficient (
i) varies from close
to 0 for a highly permeant cosolvent to 1 for a cosolvent which does
not cross the cell surface (e.g., glycerol has a low
and sucrose
has a high
with respect to the surface of E. coli [see
below]). The significance of
can be grasped by recognizing that a
cosolvent flux sufficiently rapid (with respect to solvent flux) to
collapse the osmolality gradient will attenuate the solvent flux
(Jv). In terms which are important for
osmosensing, Pf and
i
contribute to the rate and extent of solvent flux and hence to the
duration of imposed osmotic gradients (
Osm), the rate of change of
hydrostatic pressure (
P), and the rate at and degree to
which a plastic, membrane-bounded osmotic compartment will be deformed
in response to an osmotic shift.
Water crosses biomembranes via three pathways: the phospholipid
bilayer, aquaporins (water-selective channels), and integral membrane
proteins with other functions (e.g., transporters and channels designed
to translocate substrates other than water) (52, 284, 307).
The relative contributions of these pathways depend directly on the
numbers of the relevant proteins per unit membrane area (and, in the
case of the last pathway, the availability of substrates). The osmotic
water permeabilities of phospholipid bilayers
(Pf in the range 10
3 to
10
2 cm/s) are usually sufficient to permit equilibration
of water across the membrane on a millisecond timescale. Aquaporins
raise Pf to values in excess of
10
2 cm/s and hasten equilibration accordingly
(284). The physiological roles of aquaporins have not been
defined. However, their presence suggests that under at least some
physiological conditions, transmembrane water flux via the phospholipid
bilayer, alone, is unacceptably slow. Although water does cross
biomembranes via transporters and channels other than aquaporins, the
contributions of transporters and channels to total water flux may be
relatively small (284, 307). Our understanding of the
influence of cosolvents on the water permeabilities of phospholipid
bilayers is currently limited (see, e.g., reference
17).
Like that of water, transmembrane cosolvent flux may in principle be
either passive (occurring via the phospholipid bilayer or nonspecific
pathways involving membrane proteins) or mediated (occurring via
cosolvent-specific integral membrane proteins). Since the passive
permeabilities of biomembranes for many biologically relevant solutes
are orders of magnitude lower than that of water, solute-specific
channels or transporters are required if high solute flux rates are to
be attained (78) and the passive permeabilities for solutes
are often ignored. In fact, passive permeabilities are important for
certain biologically relevant cosolvents (e.g., glycerol, urea, and
NH3), and they may become important when cosolvents, even
those of low passive permeability, are used to impose large osmotic
gradients (133, 180). The passive permeabilities of phospholipid bilayers and biomembranes for solutes are known to increase dramatically near both TM and
TH (52, 60, 165). Although the
temperature dependence of passive membrane permeability has been
extensively explored, the degree to which absolute cosolvent levels (as
opposed to cosolvent gradients) influence cosolvent permeabilities is
not well characterized.
Mechanical properties of membranes. A membrane can be defined, mechanically, as "a material with a very small thickness in comparison with its radii of curvature which separates two adjacent, liquid-like domains and supports the stresses created by the embedding medium" (19). To understand membrane-associated osmosensors, it may become necessary to link our understanding of membrane molecular structure and dynamics (with a length scale up to a few nanometers) with our understanding of the membrane as a continuum of condensed matter (with a length scale greater than 500 nm). Barriers to the attainment of that goal include both difficulties of communication among investigators and technical limits to the study of phenomena which occur on the relevant length scale and timescale (19).
To define the mechanical properties of a biological membrane, it would be necessary to fully describe the rates and extents of shape changes that occur upon application of defined forces (stresses) in vivo. For an elastic membrane, each applied stress will result in some strain, i.e., some reversible shape change. Stress and strain are related by proportionality constants (elastic moduli) determined by material properties of the membrane:
|
(7) |
TIMELINE OF OSMOSENSING
|
|
|---|
Osmoregulators are devices that implement the response of an organism to changing environmental osmolality. An individual device may both detect and respond to solvent changes (i.e., osmosensors may also be osmoregulators). Alternatively, osmosensors and osmoregulators may be separate and communication between or among them may require additional signal transduction machinery. The high water permeability and solute selectivity of biomembranes ensure that changes in extracellular osmolality imposed with membrane-impermeant cosolvents trigger extensive changes in cell structure and chemistry. Thus, in principle osmosensors may detect changes in extracellular water activity (direct osmosensing) or they may detect and elicit responses tailored to address secondary consequences of osmotic shifts (indirect osmosensing). It is therefore expected that an array of osmosensors may detect and control a temporal cascade of cellular changes and osmoregulatory responses. As a result, the "osmotic history" of each cell will determine its response to new osmotic stimuli (76, 261).
The following discussion is designed to place putative bacterial osmosensors within the cascade of osmotically induced changes to cell structure and physiology, thereby identifying the stimuli to which each osmosensor may (or may not) respond. This process of correlation and elimination is important, since the list of stimuli which could, in principle, be detected by each osmosensor is long (Table 2).
Phases of the Osmotic Stress Response
When subjected to an increase or decrease in the osmolality of the suspending medium (an osmotic upshift or downshift, respectively), E. coli cells change as illustrated in Fig. 1. This review focuses primarily on membrane-based sensory processes that occur during phase I of this response. Phases II and III are considered only to the extent that they illustrate the physiological objectives met by osmoregulatory processes and the relevant changes in cell structure associated with steady-state exposure to media of various osmolalities. The timescales of these events have not yet been fully defined, and the interpretation of existing evidence concerning the timescales of phases I and II is subject to ambiguities (see Appendix). Nevertheless, the events listed as phase I of the response to an osmotic upshift can be considered to occur within milliseconds to minutes of an osmotic shift. Phase II (which also begins on imposition of an osmotic shift) extends until approximately 40 min or 10 to 20 min after the shift for bacteria cultivated in the absence and presence of osmoprotectants, respectively. Phase III is highly condition dependent and can extend for 1 h or more after the shift. The timescales for water uptake (phase I) and release of cytoplasmic cosolvents (phase II) after an osmotic downshift are at or below the limits of the experimental techniques that have been applied to date. These phases are complete within 1 to 2 min, however, and the ensuing cosolvent reaccumulation (phase III) is complete within 10 to 20 min after the shift. The evidence on which these estimates are based is discussed further below.
Most studies have focused on effects of osmotic upshifts or of osmotic downshifts or of steady-state adaptation to either of these conditions. Osmotic upshifts and downshifts have usually been applied to bacteria cultivated in low- and high-osmolality media, respectively. Additional insight regarding osmosensing will be gained by considering, as a continuum, cellular responses to both increases and decreases in medium osmolality (see, for example, Parker's assessment of changes in cell volume versus macromolecular crowding as triggers of regulatory volume changes in canine erythrocytes [207]). Such studies will be facilitated by examining organisms with sufficient osmotolerance to permit the application of significant osmotic shifts, both up and down, after cosolvent loading (e.g., Lactobacillus plantarum [80, 81] and Halomonas elongata).
Bacterial responses have been examined at different growth phases (usually either mid-exponential or late exponential phase) and with different growth status during the experiment (growing or partially or fully nutrient deprived). Significant cellular remodeling accompanies both long-term (minutes to hours) osmoadaptation and the transition to stationary-phase growth. Thus, the patterns outlined in Fig. 1 will be refined as the short- and long-term effects of osmolality, growth phase, and nutrient status are disentangled.
Cell Structure
Changes in extracellular osmolality may elicit changes in cell structure and/or water fluxes across the cell surface. The following discussion is designed to identify (i) osmotically induced structural changes which could be detected by membrane-based osmosensors, (ii) osmotically induced structural changes which may influence subsequent osmoregulatory responses, and (iii) experimental tools which may assist researchers in identifying osmosensors and the signals to which they respond.
Turgor pressure (
P) is defined as the hydrostatic
pressure difference which balances the osmotic pressure (or osmolality) difference between cell interior (i) and exterior
(o), rendering the chemical potentials
(µw) of intracellular and extracellular water
(see equation 1) equal at equilibrium. For cells which can be treated
as two-compartment systems:
|
(8) |
P, Osmi or
Osmo cause solvent flux across the cell surface
to reestablish the equilibrium described by equation 8. On the basis of
measured osmotic water permeability coefficients for phospholipid
bilayers and membrane vesicles, equilibration is expected to occur
within seconds of an osmotic shift (305). Since large cells
(e.g., those of plants and some eukaryotic microorganisms) can be
impaled,
P and Osmi can be
manipulated directly (89, 102, 210). Such techniques may
also be applicable to giant bacterial cells created by mutation and/or
antibiotic treatment. The rate of solvent flux and the participation of
particular cosolvents in passive cellular adjustment to osmotic shifts
are illustrated (for fluxes of small magnitude) by equation 6.
Turgor pressure imposes stress on the cell surface. For a spherical cell with a very thin surface layer against which turgor pressure is exerted, the relationship between turgor pressure and the imposed stress (S) would be
|
(9) |
Like those of phospholipid membranes, the mechanical properties of cell surfaces may in principle be described in terms of both their stiffness (or viscosity) and their elastic moduli (their ability to undergo various reversible deformations). For example, bacterial murein layers are both stiffer and more elastic than cytoplasmic membranes (as discussed by Thwaites and Mendelson [274]). For a spherical cell with a single, thin, elastic surface layer, the relationship between surface stress and strain would be
|
(10) |
A/A is the strain, i.e., the
proportional change in the cell surface area in response to the imposed
stress. In the simplest case, k would be constant regardless
of the position on the cell surface, orientation on the cell surface,
or magnitude of the applied stress.
Equations 9 and 10 can be combined to relate cell surface strain
(
A/A) and the stress imposed by turgor pressure
(
P) for a spherical cell:
|
(11) |
P]),
elastic modulus (k), and surface layer thickness
(h). (ii) Thicker cell surfaces expand and contract less
(have lower strain) under a given stress (turgor pressure
[
P]) than do thinner surfaces for a given elastic
modulus (k) and cell size (r). (iii) In cells with elastic surfaces (small k), changes in extracellular
osmolality may be accommodated by both water fluxes and adjustments in
cell surface area. The time courses of solvent flux and of structural change after an osmotic perturbation are then determined by
Pf,
i, k, and viscosity
coefficients which determine the rates at which structural changes can occur.
By using a microscopic pressure probe to measure and manipulate turgor
pressure, osmotic responses and stress-strain relationships have been
examined for large cells of plants and eukaryotic microbes. Such
analyses suggest that for those systems at least,
i, Pf, and k
can vary with turgor pressure (89, 200, 210). Cellular properties such as surface stress and elastic modulus cannot readily be
deduced from measurements of turgor pressure, osmotic gradients, and
cell dimensions for nonspherical cells or for cells in which the
elastic modulus varies with position on the cell surface, orientation
on the cell surface, or magnitude of the applied stress. Since
bacterial turgor pressure cannot readily be manipulated or measured
(see Appendix), current prospects for quantifying surface stress and
strain in whole bacteria are poor. However, pertinent information can
be obtained by examining the mechanical properties of cellular
constituents (see, e.g., reference 274).
The relationships outlined above suggest that the kinetics of
osmotically induced solvent flux, of associated structural and biochemical changes, and hence of the time constants required of
osmosensory and osmoregulatory processes can be adjusted by remodeling
the cell surface to alter its reflection coefficient (
i) and osmotic permeability coefficient
(Pf) or its mechanical properties (its stiffness
and elastic moduli). For example, reducing the reflection coefficient
for a cosolvent would facilitate its rapid equilibration across the
cytoplasmic membrane, reducing or eliminating osmotically induced water
flux. For a benign cosolvent (e.g., glycerol), such equilibration may
be more favorable to cellular survival and growth than cosolvent
exclusion. Reduction of the osmotic permeability coefficient
(Pf) would slow cellular dehydration in response
to osmotic upshifts. Adjustment of surface stiffness and elasticity,
either in general or within local cell surface regions, would modulate
the degree to which swelling, shrinkage, and shape changes occur in
response to extracellular osmolality changes.
Passive structural responses of bacteria to osmolality changes. How are the structures of bacterial cells influenced by extracellular osmolality changes? Measurements of many cellular properties are pertinent to this topic. They include turgor pressure; cellular, cytoplasmic, and periplasmic volume (cell partitioning); cell density (not population density); cell size, shape and ultrastructure; and the mechanical properties of cell surface layers. Relevant techniques are discussed in the Appendix. Some bacteria have been shown to maintain turgor pressure (references 45 and 294 and references cited therein). For example, the turgor pressure for E. coli cells cultivated in standard, defined media is believed to be 3 to 5 atm. Although the mechanical properties of bacteria have not been fully analyzed (for reasons discussed above), studies of osmotic effects on cell size and hydration offer some insight into their osmotic relations.
Building upon earlier experiments performed with a variety of bacteria, Alemohammad and Knowles (1) used turbidimetry and solute distribution measurements in parallel to assess the immediate effects of salts, sucrose, and glycerol (osmotic shifts of up to 0.55 osmolal) on resting E. coli cells. The turbidity increased over 2 min to reach a new value that was stable for 1 h after treatment with NaCl, MgCl2, or sucrose. Decreases in both cell and cytoplasmic volume were observed by measuring solute exclusion 30 min after the shift. Stopped-flow spectrophotometry was used to establish that glycerol caused only a transient (maximal at approximately 0.5 s and reversed within 8 s) increase in the turbidity of such cell suspensions. Subsequent research has confirmed that the cytoplasmic membrane has a low reflection coefficient for glycerol (
Gly), which can be further reduced by the expression of
facilitator GlpF (164).
These experiments established the time frame for the response of
E. coli cells to osmotic upshifts and validated the use of glycerol as a membrane-permeant cosolvent during studies of
osmoadaptation by E. coli. The fact that elevation of
extracellular osmolality with glycerol fails to activate an
osmoregulatory response is often taken as evidence that a change in
transmembrane osmolality gradient (or its consequence) is sensed.
However, dehydration of an osmosensor as a result of cosolvent
exclusion from intramolecular water pools could also act as a stimulus
(see "Hydration forces" above). Just as its lack of charge and its
small size allow glycerol to permeate cell membranes, they may also
allow it to penetrate intramolecular water pools and hence fail to
alter macromolecular (osmosensor) conformation.
The impact of osmotic upshifts on the cellular, cytoplasmic, and
periplasmic water content (microliters per milligram of protein or dry
weight) of nutrient-deprived bacteria (E. coli and
Salmonella only) has been assessed by applying the solute
distribution technique (1, 38, 39, 260) (see Appendix).
Decreases in both cell and cytoplasmic water contents were observed
when osmotic upshifts were imposed with solutes expected to be excluded
by the cell wall (polyglutamate) or the cytoplasmic membrane (sucrose,
MgCl2, or NaCl) but not with cytoplasmic membrane-permeant
solutes (glycerol or ethanol). Osmotic shifts imposed on
Salmonella with sucrose or on E. coli with
sucrose or NaCl were found to increase the fraction of cell water that
was periplasmic. However, the degrees and morphological consequences of
plasmolysis differed when osmotic upshifts of the same magnitude (0.365 osmolal) were imposed on E. coli cells with NaCl or sucrose
(1).
Koch (125) used turbidimetry to analyze cellular changes
5 s and 1 min after small osmotic upshifts (no larger than 0.25 osmolal) were imposed by adding arabinose or xylose to growing E. coli cells. Measurements were performed by stopped-flow
spectrophotometry and interpreted by fitting the data to a
light-scattering model in which the total intensity of the scattered
light (presumed to cover 0° through 180°) was related to cell size.
Cells were treated as solid rods (shapes obtained by averaging that of
a cylinder and that of an ellipse) of uniform and invariant refractive index (corrections for changes to the refractive index of the medium
were applied). Turbidimetric changes were reported as cell surface area
and volume changes. Arguing that the osmotic upshifts were too small to
cause plasmolysis and that the measurement times were too short to
accommodate metabolic changes (sugar uptake and/or osmoregulatory
activity), Koch reported that increasing the osmotic upshifts elicited
continuous cell surface area and volume decreases (without abrupt
changes) to approximately 40 and 50%, respectively.
Baldwin et al. (12) measured changes in the buoyant density
(density gradient centrifugation) and size (Coulter counter and light
microscopy) of nutrient-deprived E. coli cells that were
subjected to small (0.15- to 0.45-osmolar) osmotic up- and downshifts
with NaCl or sucrose. Measurements performed within 10 min of the
osmotic shift indicated that buoyant density increased as cell size
decreased in response to osmotic upshifts and that buoyant density
decreased as cell size increased in response to osmotic downshifts.
However, the volume changes were smaller than those reported by Koch
(125) (the surface area decreased 33% [microscopy] after
a 0.15-osmolar upshift, and the volume decreased 21.5% [Coulter
counter] after a 0.35-osmolar upshift). Since increased cellular
buoyant density would certainly be accompanied by an increased cellular
refractive index, Koch's assumption that all turbidity changes would
reflect changes in cell size (125) was not justified and may
have contributed to overestimation of the reported area and volume changes.
By applying phase-contrast microscopy to filamentous (ftsA
and ftsI) E. coli mutants, Koch et al.
(127) observed decreases in cell length (on average, 17%)
in response to detergent (sodium dodecyl sulfate) disruption of the
cytoplasmic membrane. The observed shrinkage was attributed to
elasticity of the murein layer. This elasticity was tested further by
measuring the angular dependence (4° through 12°) of the intensity
of unpolarized light scattered by sacculus suspensions as their pH was
titrated over a range designed to adjust the net sacculus charge from
positive through negative values (129). The data were fit to
a model of the sacculi as hollow prolate ellipsoids, assuming a
constant thickness and refractive index of the murein shell and a
constant unique axial ratio of the ellipsoids, in order to extract
changes in sacculus width, reported as sacculus area. Although
systematic changes in light scattering by the sacculi were elicited by
pH changes, their interpretation in terms of sacculus area may not be
justified. Others have also reported murein elasticity, however
(summarized in reference 58). Taken together, these
results suggest that bacterial cell surfaces are elastic, with their
elastic moduli varying with cell volume (perhaps turgor pressure) and
ionic strength.
The studies summarized above suggest that the cytoplasmic membrane and
cell wall of E. coli act as a unit structure with a sufficiently small elastic modulus (k) to permit overall
cell shrinkage in response to cellular dehydration. The available
measurements do not indicate whether turgor pressure is maintained at a
constant level as cells shrink in this way or whether it declines
steadily (see the discussion by Csonka and Hanson
[47]). It is also difficult to assess whether these
adjustments are accompanied by changes in periplasmic thickness that
might be detected by an osmosensor. The cytoplasmic membrane partitions
the cell interior into periplasmic and cytoplasmic compartments. The
osmolalities of the cytoplasm and periplasm are sometimes assumed to be
equal (228, 260), but the experimental evidence supporting
that assumption is extremely limited. If periplasmic and cytoplasmic
osmolalities were always equal, the cytoplasmic membrane would be
subject to area dilation or condensation only as a result of mechanical
stress transmitted by its linkage to the cell wall and/or the nucleoid
(see below). Assessment of the relative osmolalities of the cytoplasm
and periplasm for bacteria growing in diverse solvent environments
should be a high experimental priority.
The outer membrane is covalently linked to the murein sacculus via
lipoproteins (reference 147 and references therein)
and some porins. Although structural links between the outer membrane and the murein layer may be stronger and/or more densely spaced than
those between the cell wall and the cytoplasmic membrane, the latter
links certainly exist (147). The potential involvement of
Bayer's bridges in protein secretion and of periseptal annuli in cell
division has motivated extensive electron microscopic analyses of
plasmolyzed E. coli cells. These observations clearly indicate that membranous links between the cytoplasmic membrane and the
cell wall (Hechtian strands) are retained despite extensive plasmolysis
(118, 126, 251, 298). Limitations on fluorescence recovery
after photobleaching of periplasmic probes indicate that the periplasm
is partitioned, presumably by links between the outer and cytoplasmic
membranes (72). Woldringh et al. (299) and
Nanninga (198) emphasize the extensive linkage of cell wall and cytoplasmic membrane effected by murein biosynthetic enzyme complexes as well as the linkage of cytoplasmic membrane and nucleoid effected by cotranslational protein secretion. Thus, the cytoplasmic membrane acts as a structural link between the cytoplasm (including the
nucleoid) and the cell wall, suggesting that it may experience local
variations in mechanical stress in response to both metabolic activity
and osmotic shifts.
Plant cell plasmolysis has been examined to assess the molecular bases
for freezing and salinity tolerance (203, 219). These studies, too, reveal the presence of Hechtian strands and plasma membrane vesiculation in plasmolyzed cells. It has been suggested that
such structures may maintain the cytoplasmic membrane surface area,
cell integrity, and polarity and focus mechanical stress from the wall
to the membrane during the protoplast shrinkage that accompanies
plasmolysis. In addition, vitronectin- and fibronectin-like proteins,
present in enhanced numbers in NaCl-adapted tobacco cells, are proposed
to mediate enhanced membrane-wall adhesion (309). It would
be interesting to learn whether the incidence of wall-membrane
adhesions also varies as a function of bacterial growth medium
osmolality and/or salinity.
Cell surface modifications and osmosensing.
Does
structural remodeling of the cell surface influence the osmotic stress
response? Genetic screening has revealed genes encoding E. coli cell surface molecules whose expression is modulated by
extracellular osmolality (Table 3). In
most cases, steady-state levels of these elements have been reported
but their influence on the kinetics of the osmotic stress response has
not.
|
Osmotic shifts, cytoplasmic composition, and nucleoid organization. For E. coli cells (exponential or stationary phase) cultivated in low-osmolality (Luria-Bertani) medium, the macromolecule concentration of the cytoplasm was estimated at 0.3 to 0.4 g/ml. Macromolecules were estimated to occupy 34 to 44% of the cytoplasmic volume (313). This volume exclusion (or macromolecular crowding) is a consequence of the collective presence of diverse macromolecules. A similar effect would be achieved in a homogeneous, 0.3- to 0.4-g/ml solution of a globular protein with a molecular mass in the range 72 to 79 kDa if it did not aggregate or undergo specific interactions with any other test molecule.
Phase separation
the formation of distinct liquid, aqueous phases
is
a well-known correlate of macromolecular crowding (291). It
can result in the formation of macromolecule-rich and -poor phases or
in the formation of phases enriched for different, incompatible macromolecules. The phase separation between nucleoid and cytoplasm within bacteria (281) can be considered in these terms.
Polyamines (e.g., putrescine [tetramethylene diamine]),
K+, and proteins may all be expected to participate in the
crowding-induced phase separation of the nucleoid from other
cytoplasmic constituents.
Zimmerman and Murphy argue that bacterial DNA is always in a condensed
state as a result of macromolecular crowding (312). The
bacterial nucleoid is estimated to have a DNA concentration of 50 to
100 mg/ml and to occupy one-eighth to one-fifth of the volume within
the cell envelope. Hildebrandt and Cozzarelli suggest that the balance
among DNA condensation due to macromolecular crowding (expected to
enhance associations), the connectivities of particular DNA sequences,
and the masking or spatial sequestration of those sequences by proteins
ensure their appropriate reactivity for processes such as transcription
and replication (99). Stabilization by macromolecular
crowding has now been reproduced in vitro for low-salt, spermidine
nucleoids from E. coli, which retain nucleoid proteins
(193, 194). Analysis of the resulting structures suggested that crowding might contribute to nucleoid condensation both directly, by condensing DNA, and indirectly, by enhancing partition of particular proteins into the nucleoid phase.
Specific cations and anions (and not ionic strength per se) are known
to influence nucleoid structure and modulate transcription (36,
151). Cations accumulate in the bacterial cytoplasm and nucleoid
because DNA and RNA, both present at high levels, are polyanions
(3). The physiologically significant nucleic acid counterions in E. coli include K+, polyamines
(e.g., putrescine), and proteins. Thus, nucleic acids act as
ion-exchange matrices and cation exchange is required for gene
expression (36, 91, 151).
Decreased cellular hydration and alterations in cytoplasmic ion content
are immediate and sustained consequences of exposure of bacteria to
high-osmolality media. It is therefore possible that osmosensors
located in the cytoplasm (or on the surface of the cytoplasmic
membrane) detect significant changes in macromolecular crowding under
these circumstances. Osmotic upshifts also transiently inhibit DNA
replication and cause transient or sustained induction of the
transcription of certain genes (see below). To understand how changes
in hydration influence replication or transcription, it is necessary to
consider how macromolecules and inorganic ions, acting as cosolvents,
influence nucleoid architecture. Further consideration of this topic is
beyond the scope of this review. It is important to bear such effects
in mind, however, when considering the sensory inputs to which
osmoregulatory K+ transporters may respond (see below).
Energy Metabolism
Osmotic upshifts. Avi-Dor and his colleagues first identified effects of osmotic upshifts on energy-transducing enzymes integral to bacterial cytoplasmic membranes through their studies of osmoadaptation by Ba1, a moderately halophilic, obligately aerobic gram-negative bacterium (summarized by Ken-Dror et al. [120]). In E. coli, respiration (both NADH and succinate dependent) (101, 172), facilitated diffusion of glycerol or xylitol (101), and solute uptake via sugar and amino acid transporters of the ATP binding cassette (ABC), phosphotransferase, and ion-linked categories (84, 101, 236, 237) are all inhibited within seconds when an osmotic upshift is imposed with salts or sucrose but not with glycerol. This attenuation of energy metabolism defines phase I of the physiological response to an osmotic upshift (Fig. 1). Activation of transporters implicated in osmoregulation occurs in strong contrast to these effects (see below).
Meury described strong (75%), transient inhibition of respiration by an osmotic upshift imposed with 0.6 M NaCl (172). This effect was partially reversed and a new, lower respiration rate was established approximately 30 min after the shift. Houssin et al. found respiration (20 min after the shift) to be systematically reduced as the osmolality increased (101). These effects were accompanied by a large and transient (reversed within less than 10 min) increase in cellular ATP concentration, but it could be attributed to cell volume changes (101, 201). Effects of osmotic shifts on the proton permeability of the membrane or F0F1-ATPase activity have not been reported. Dinnbier et al. reported small, transient (reversed within 20 min) increases in cytoplasmic pH and
pH in response to an osmotic upshift
imposed with NaCl (0.5 M) (56). E. coli possesses
two Na+/H+ antiporters (NhaA and NhaB), both of
which are implicated in the maintenance of
pNa+, pH
homeostasis, and salinity tolerance (205). Wild-type
bacteria can grow in minimal medium supplemented with up to 0.7 M NaCl or KCl. Bacteria lacking nhaA tolerate less than 0.4 M NaCl
and remain unaffected by 0.7 M KCl (204). Deletion of
nhaB, alone, is without effect, but deletion of both loci
produces sensitivity to as little as 0.03 M NaCl (217). The
Na+ sensitivity of nhaA and nhaA nhaB
mutants is exacerbated as the medium pH increases, and an additional
system, ChaA, is implicated in Na+ and Ca2+
extrusion at high pH (202). These systems, along with other K+/H+ and Ca2+/H+
antiporters, are expected to mediate alkalinization of the cytoplasm when osmotic upshifts are imposed with the corresponding salts. They
are tightly controlled (205). Thus, although transient
changes are likely, no steady-state alteration in either component of the proton motive force (neither
pH nor the membrane potential, 
) was detected during the period from 20 to 40 min after osmotic upshifts (0.28 to 1.88 osmolal) were imposed on E. coli with
NaCl or sucrose at pH 7.6 (101). It would be interesting to
know whether ionic and nonionic osmolytes exert differential effects in
a more alkaline environment.
How do osmotic upshifts inhibit respiration? The rate and level at
which respiration resumed after an osmotic upshift were dramatically
attenuated for E. coli cells deficient in K+
uptake (kdpABC5 trkA405 trkD1) (172). Ken-Dror et
al. (120) suggested that glycine betaine stimulated
respiration in salt-stressed bacterium Ba1 because
Na+/glycine betaine symport satisfied an Na+
requirement for respiration. These observations suggest that cation
accumulation during osmoadaptation is required to restore membrane-linked energy metabolism. For E. coli, this
requirement may be K+ specific (not merely a function of
cytoplasmic rehydration) since glycine betaine accumulation did not
fully replace K+ accumulation in this respect
(172). A specific K+ requirement for respiration
by EDTA-treated E. coli cells has been reported
(206), but its mechanistic basis is unknown.
It may appear contradictory that ATP pools and the proton motive force
remain stable while respiration is reduced in response to osmotic
upshifts. These effects may be at least partially explained by
respiratory control. As expected on that basis, the proton ionophore
carbonyl cyanide m-chlorophenylhydrazone (CCCP) stimulated respiration by NaCl- or glucose-stressed E. coli cells
(168). Direct effects of osmolality on membrane lipid and/or
protein structure and organization are postulated to be responsible for the generalized inhibition of membrane-based functions
(101). The operation of specific regulatory mechanisms has
not been ruled out, however. The observations summarized above suggest
that only small, transient perturbations to the proton motive force and ATP levels are associated with osmotic upshifts in E. coli.
While such transient changes could conceivably trigger osmosensory
responses (e.g., phosphorylation cascades), they cannot account for
more sustained phenomena.
Osmotic downshifts. Osmotic downshifts have long been known to elicit rapid and extensive solute efflux from bacteria, including E. coli (279), the cyanobacteria Synechococcus and Synechocystis (231), and the halophile Ectothiorhodospira halochloris (280). It is also evident that the specificity and extent of solute release depend upon the history of the bacteria, the magnitude of the osmotic gradient, and the speed with which it is imposed (see, e.g., references 16 and 176), as well as the temperature (see the discussion by Schleyer et al. [249]). For example, compatible-solute efflux (see below) can occur without (241, 249) or with (16) ATP efflux, and this difference is correlated with the magnitude and conditions of the imposed shifts (249). These observations are consistent with known effects of temperature and imposed osmotic gradients on phospholipid bilayer permeability.
Milner et al. observed decreases in the initial rates of glutamine uptake (via an ABC transporter [more than sixfold]), serine uptake (via an Na+/serine symporter [approximately twofold]), and proline uptake (via ProP, an osmoregulatory H+/proline symporter [sevenfold]) when E. coli cells cultivated in 0.3 M NaCl-supplemented minimal medium were introduced to a transport assay medium lacking that supplement (180). Cairney et al. showed strong reductions in the activities of the osmoregulatory transporters ProP and ProU (an ABC transporter) of Salmonella typhimurium under analogous conditions (31). No bioenergetic parameters (e.g., respiration rates, ATP levels,
,
pH, and other ion gradients) were reported, but comparisons with
other data suggest that the reduced transport activities may have
reflected both ATP efflux and dissipation of the proton motive force.
Ruffert et al. found that a transient decrease in ATP levels and a
sustained and profound decrease in the membrane potential accompanied
the specific efflux of glycine betaine elicited by continuous dilution of a Corynebacterium glutamicum suspension (241).
The capacity for active solute uptake is rapidly regained after osmotic
downshifts (see below), suggesting that energy metabolism resumes rapidly.
Adjustment of Cytoplasmic Solvent Composition
As noted above, the modulation of cytoplasmic solvent composition reverses the growth-inhibitory effects of environmental osmolality changes on bacteria. To identify putative osmosensors and the signals that they detect, the following discussion focuses on cytoplasmic cosolvent selection as well as the temporal sequence and consequences of cosolvent accumulation and release. More detailed information about osmoregulatory genes and enzymes in diverse organisms can be found in references 6, 45-47, 74, 87, 119, 178, 220, and 263.
Extensive studies of E. coli indicate that the pattern of response to an osmotic upshift is contingent upon the availability of osmoprotectants. The availability of K+, the magnitude of the imposed shift, the medium pH, and the supplies of carbon and nitrogen for growth are also important in tuning the osmoregulatory response to suit particular conditions. The relative importance of K+ for osmoregulation by other organisms is not yet clear, however (220). For E. coli cells in the absence of osmoprotectants, K+ influx and associated adjustments in levels of other ionic and nonionic cosolvents occur during phases II and III of the response, extending for as long as 1 h after the shift (Fig. 1). Phase II is compressed and altered in the presence of osmoprotectants, extending for as little as 10 to 20 min after the shift.
Cosolvent accumulation: absence of osmoprotectants. K+ uptake and putrescine efflux are triggered as other energy-linked functions cease within seconds after an osmotic upshift. Transporters Trk and Kdp mediate K+ accumulation by E. coli in response to osmotic upshifts. Osmotic control over the synthesis and activity of these transporters, exerted at the level of the cytoplasmic membrane, is discussed below.
Putrescine efflux accompanies K+ uptake in response to osmotic upshifts (up to 1.6 osmolar) imposed with NaCl, MgCl2, KCl, or sucrose (but not glycerol), and putrescine is rapidly reaccumulated when cells are transferred to a low-osmolality medium (192). In experiments with whole bacteria, putrescine efflux in response to an osmotic upshift was contingent on the availability of exogenous K+, but K+ uptake was not reduced by prior depletion of endogenous putrescine. The PotE protein of E. coli, predicted to be an integral membrane protein with 12 transmembrane
-helices, possesses weak putrescine uptake and putrescine/ornithine antiport activities (5 and 1 nmol/min/mg of protein, respectively, in bacteria expressing
recombinant plasmid-encoded potE) (114-116). The
former activity is dependent upon the proton motive force. Neither the
ion-coupling specificity and stoichiometry nor the dependence of this
activity on K+ or osmolality has been reported, nor has the
impact of a potE mutation on the initial phase of
osmoadaptation. These experiments are necessary to assess whether this
system may mediate the osmoresponsive putrescine efflux first described
by Munro et al. (192).
K+ accumulation, particularly in cells exposed to
very-high-osmolality media, exceeds the capacity for charge balance
afforded by proton and putrescine efflux (6, 7, 56). Anions
must therefore accumulate. Glutamate begins to accumulate within
approximately 1 min of an osmotic upshift in E. coli
(56, 168). Indeed, glutamate fulfills this role under most
conditions and in most organisms examined to date, although other
species may contribute (e.g., morpholinepropanesulfonic acid [MOPS]
[40] and unknown species in nitrogen-limited E. coli cells [293]). In view of the high flux via
the glutamate biosynthetic pathways even at low osmolality, reduced
utilization of glutamate for the synthesis of other nitrogen-containing compounds (including proteins) may be sufficient to ensure glutamate accumulation in response to an osmotic upshift (168).
However, K+ accumulation is not contingent upon glutamate
accumulation in E. coli (168). The coincident
glutamate and K+ efflux which occurred when ammonium was
added to an S. typhimurium glnE mutant may have resulted
from the activation of efflux mechanisms in response to massive
glutamine accumulation, not to a specific glutamate requirement per se
(303). Observed changes in K+, putrescine, and
glutamate levels have been estimated to be sufficient to maintain
electroneutrality (36, 168).
K+ replaces putrescine as a nucleic acid counterion during
phase II of adaptation to an osmotic upshift. McLaggan et al.
(168) estimated the quantity of K+ in E. coli not constrained by interactions with fixed anions (the
K+ released by cold osmotic downshock). K+
release increased from 0.22 to 0.67 µmol/mg (dry weight) and the
quantity of residual K+ increased from 0.36 to 0.64 µmol/mg (dry weight) for E. coli cells cultivated in
medium of 0.17 to 1.24 osmolal. Richey et al. arrived at similar
estimates on the basis of nuclear magnetic resonance spectroscopy
(233). Guttman et al. concluded that interactions with rRNA
(not DNA) influenced the nuclear magnetic resonance spectrum of
approximately 60% of the K+ in the cytoplasm of E. coli (cultivated at low and high osmolality) (90). It
has been suggested that the exchange of putrescine for K+
elevates cytoplasmic osmolality while reducing the impact of K+ uptake and glutamate accumulation on cytoplasmic ionic
strength (36, 192). An increase in ionic strength would
inevitably accompany the accumulation of osmotically active
K+ and counterions in response to high-osmolality media,
however. It is unfortunate that although two physicochemically
different K+ pools have been identified, it has not been
possible to estimate their osmotic activities.
For E. coli cells growing in the absence of osmoprotectants,
biosynthetic accumulation of compatible solute trehalose follows glutamate accumulation and overlaps phases II and III of the response to an osmotic upshift (Fig. 1) (56). Trehalose accumulation is enhanced in bacteria growing in nitrogen-limited media and diminished in bacteria growing in carbon-limited media
(293). It is effected through transcriptional control of the
treA, treBC otsA, and otsB loci and
perhaps also through the activation of the trehalose biosynthetic
enzyme OtsA by K+ glutamate (see discussions by Lucht and
Bremer [159] and Horlacher and Boos
[100]). The mechanism of osmoregulatory trehalose
accumulation is not discussed further here because it does not appear
to involve membrane-based osmosensing.
Phases II and III of the response to an osmotic upshift are further
defined by increased transcription of other osmoresponsive genes and
operons (and by reduced transcription of the ompF locus) (Table 3). Expression of the genetic loci proP and
proU by E. coli is induced in the absence of the
substrates of their encoded transporters. Experiments performed with
lacZ fusions indicate that transcription of the
kdp, proP, and proU loci begins within minutes and proceeds with a half time of approximately 20 to 30 min. In
bacteria proficient for glycine betaine transport, transcription of
proP and proU (but not the kdp operon)
is attenuated in the presence of glycine betaine, indicating that
osmoprotectant accumulation attenuates the activating signal for the
former systems (59, 108, 141, 169, 170, 269).
These osmoresponsive loci can be divided into two categories. For the
first group, represented by proU and proP, no
locus-specific, trans-acting regulatory factor appears to
participate in osmotic induction. For the second group, represented by
ompF-ompC and the kdp operon, transcription is
controlled by a locus-specific two-component regulatory system
(EnvZ-OmpR and KdpD-KdpE, respectively). Cytoplasmic
membrane-associated sensor kinases EnvZ and KdpD alter transcription in
response to osmotic changes and other signals. The mechanism by which
KdpD detects osmotic shifts is discussed in more detail below (see
"K+ transporters of E. coli").
Cosolvent accumulation: presence of osmoprotectants. Osmoprotectants are compounds that enter the cytoplasm through the action of osmoregulatory transporters and act as or are converted to compatible solutes. In all organisms examined to date, multiple transporters, falling into the ion symporter and ABC transporter classes and with overlapping substrate specificities, mediate osmoprotectant uptake.
ProP, a broad-specificity osmoprotectant/H+ symporter, is activated when an osmotic upshift is imposed on cells (E. coli or S. typhimurium) cultivated in low-osmolality media (59, 84, 179). It is now evident that secondary transporters which mediate osmoprotectant uptake fall into distinct phylogenetic groups (246). For example, members of the major facilitator superfamily include the ProP system of E. coli (50) and OusA of Erwinia chrysanthemi (82). A second group includes the choline transporter BetT of E. coli (264) and the glycine betaine transporters OpuD of Bacillus subtilis (113) and BetP of Corynebacterium glutamicum (213). Proline transporter OpuE of B. subtilis (287) is not linked to either of these groups. Analogous activities have been identified in a variety of other organisms but have not yet been defined at a structural level (220). ProU (ProVWX), a broad-specificity osmoprotectant transporter of the ABC transporter class, is also activated when an osmotic upshift is imposed on E. coli cells cultivated in low-osmolality media (68). Systems OpuA and OpuC of B. subtilis (92, 113) are sequence homologues of E. coli ProU. Structurally undefined osmoprotectant transporters of the ABC class are present in other organisms including Rhizobium meliloti (178) and Listeria monocytogenes (283). Although some osmoprotectant transporters are similar to those of E. coli in being both activated and induced by osmotic upshifts, others are reported to respond only at the genetic or biochemical level. Technical issues may have impeded the detection of transporter regulation in some cases, however (220). Like the K+ transporters Trk and Kdp, at least some osmoprotectant transporters are not merely resistant to inhibition by osmotic upshifts. Their activities increase, in the absence of protein synthesis, if the osmolality of the external medium is raised through the addition of salts or organic osmolytes (Table 4). It is now clear that the ProP transporter can both sense and respond to an osmotic upshift. The mechanism by which this occurs is discussed further below.
|
Cosolvent efflux. Systematic analysis of solute efflux and exchange by bacteria is a recent phenomenon, motivated in part by the needs of the biotechnology industry (133). It is now clear that bacteria possess distinct uptake, exchange, and efflux mechanisms and that each of those processes is integral to metabolism. However, particular technical challenges face those who wish to differentiate efflux from exchange and "passive" efflux from efflux mediated by channels or by transporters (133). In particular, data must now be interpreted with the knowledge that multiple, poorly selective mechanosensitive channels mediate metabolite efflux across the cytoplasmic membranes of bacteria (16, 21, 49, 241).
Cosolvent efflux mechanisms may be required for the survival of bacteria that adapt to a high-osmolality medium and then experience an osmotic downshift, to offer an alternative to feedback mechanisms limiting cosolvent uptake and to provide opportunities for selective cosolvent retention (131). Rapid (1- to 2-min) release of K+, glutamate, and/or compatible solutes, without wholesale loss of metabolite pools, has been reported for Synechocystis (231), E. coli (249), B. subtilis (300), L. plantarum (80), C. glutamicum (144, 241), and L. monocytogenes (283). Thus, rapid but specific solute efflux defines phase II of bacterial responses to osmotic downshifts. Gadolinium ions (Gd3+) inhibited both mechanosensitive channel activity and the release of ATP, glutamate, and lactose but not K+ or Rb+ from E. coli. Gd3+ also reduced osmotically induced cosolvent efflux from other organisms (16, 80, 144, 241). Since Gd3+ is an inhibitor of mechanosensitive channels, these studies suggested that channels play a role in adaptation to osmotic downshifts. Gd3+ may act directly on mechanosensitive channels, or its effects may be exerted via membrane lipids (64, 65). In E. coli, K+ release, elicited by either an osmotic downshift or glycine betaine uptake, was independent of known K+ uptake and efflux mechanisms (Trk, Kdp, Kup, KefB, and KefC) (8, 249). Rapid K+ reaccumulation established a reduced K+ pool after the shift, and that process was compromised in bacteria lacking transporter Trk (249). Using osmotic upshifts to elicit K+ uptake and continuous slow dilution to elicit K+ release, Meury et al. demonstrated that these two processes followed distinct pathways (176). Unlike the former, the latter pathway excluded Rb+ and was inhibited by the eukaryotic K+ channel blockers tetraethylammonium and phencyclidine. Schleyer et al. reported nonspecific effects of Gd3+, quinine, and phencyclidine on K+ efflux and reuptake, however (249). Glycine betaine was released from S. typhimurium in the absence of the osmoregulatory transporters ProP and ProU, but serine was also released under the conditions used in this experiment. Rapid, specific loss of glycine betaine, independent of ProP and ProU, was elicited by the thiol reagents N-ethylmaleimide and p-chloromercuribenzenesulfonic acid in the absence of osmotic shifts (131). A small amount of glycine betaine was released to the growth medium when bet+ E. coli cells were cultivated in a high-osmolality medium in the presence of choline. That release was dramatically enhanced by lesions inactivating the glycine betaine-specific transporters ProP and ProU (143). By analogy, a defect in the periplasmic trehalase, TreA, required to facilitate the uptake of exogenous trehalose as glucose, stimulated the excretion of trehalose during cultivation of E. coli in a high-osmolality medium (265). Schleyer et al. observed rapid reuptake of glutamate, but not trehalose, after both were released from E. coli by an osmotic downshift (249). Thus, osmotically stimulated cosolvent efflux appears to occur via a mechanism(s) distinct from that of cosolvent uptake. Furthermore, the cytoplasmic compatible-solute levels maintained during steady-state adaptation to high-osmolality media may be set by a balance between distinct active uptake and efflux mechanisms. The high rate and limited specificity of metabolite efflux have led some authors to propose that it is channel mediated (16). Lively controversy surrounded the discovery of mechanosensitive channels in the cytoplasmic membranes of bacteria, including E. coli, B. subtilis, and Streptococcus faecalis (summarized by Berrier et al. [14]). Channels have been enumerated in patches excised from giant proteoliposomes reconstituted from an E. coli cytoplasmic membrane fraction and from giant round E. coli cells with disrupted walls. These studies revealed arrays of poorly selective stretch-activated conductances (0.1 to 2.3 nS in 0.1 M KCl) (14, 15). Whereas complex conductance patterns were observed during patch clamping of native membranes, reconstituted systems showed clusters of related conductances which differed from patch to patch. In both preparations, higher negative pressures were required to activate channels with higher conductance. Two laboratories have added evidence that mechanosensitive channels contribute to osmoadaptation. Using whole-cell patch clamp recording, Cui et al. demonstrated that 0.35- and 1.1-nS channels (400 mM symmetric KCl) could be activated by applying positive pressure to the cell interior or by decreasing the extracellular osmolality (49). These channels remained in bacteria defective for K+ efflux systems KefB and KefC (not implicated in osmoregulation) and in those deficient for mscL. A kefA defect, previously shown to enhance the K+ sensitivity of E. coli, prolonged the channel open time and rendered the conductance more pressure sensitive without changing the magnitude of the channel conductance (48). The pressure sensitivity of these whole-cell preparations may have precluded the detection of channels that open only at higher pressures. MscL, present in the cytoplasmic membrane of E. coli, is the first mechanosensitive channel to be characterized at the molecular level (268). The osmosensory mechanism of MscL and evidence for its involvement in osmotic adaptation (20) are discussed below.Osmoregulation, Turgor Pressure, Cell Growth, and Cell Division
The concept that turgor pressure is required for cell growth originated and is effectively described in the plant physiology literature (27, 200, 210). Cell growth requires plastic (irreversible) cell expansion, which can occur with or without the addition of new cell wall material. Breakage and reformation of chemical bonds can alter the shape of the cell wall (for example, making it larger in surface area and thinner) without changing its mass, but of course continuing cell growth and division require the addition of new material. In considering plant cell expansion, Lockhart (157, 158) noted two possibilities. (i) The cell wall area expands plastically by incorporating new material. Water uptake is a secondary response to the resulting decrease in turgor pressure and hence in the chemical potential of intracellular water. (ii) The cell wall area expands plastically, and without incorporating new wall material, by yielding to turgor pressure. Water uptake and the incorporation of new wall material are secondary responses to cell wall expansion.
The former theory predicts that all cell wall expansion depends quantitatively on the incorporation of new cell wall material. The latter predicts that cell wall expansion requires maintenance of turgor pressure above some threshold value, as articulated in the Lockhart equation:
|
(12) |
is a
"yielding compliance," describing the ability of the cell surface
to expand plastically (irreversibly) in response to turgor pressure,
and
Py is a critical turgor pressure or yield
threshold. The equation states that the cell will grow, if turgor
pressure exceeds
Py, at a rate determined by
the yielding compliance (
) and the degree to which
P
exceeds
Py. The yielding compliance, defined
in this way, incorporates plastic cell wall expansion with and without
the addition of new cell wall material. During steady-state cell
growth, the rate of increase of the cell volume (through uptake of
water and other materials) must match that of wall yielding; no
variation in turgor pressure is required.
Lockhart (157) concluded that the second of the above theories best described plant cell growth; the growth of walled cells has since been discussed in terms of the Lockhart equation (89, 200, 210). Nevertheless, a number of observations cast doubt on the generality of Lockhart's conclusion for all walled cells and on its extension to encompass regulation of cell growth by turgor pressure (18, 27, 43, 89, 191, 273). For example, Harold and his colleagues have shown that the oomycete Saprolegnia ferax can extend and generate normal hyphal morphology without experiencing measurable turgor pressure (95, 96, 186).
Evaluation of the common assumption that bacteria osmoregulate to maintain turgor pressure and that they maintain turgor pressure to grow is central to any discussion of osmosensing. Do bacteria maintain turgor pressure at a set point or above a critical threshold? Is there a correlation between turgor pressure maintenance and cell growth or division? If these relationships exist, are they causally linked (42)? The answers will help determine whether turgor pressure sensors should or should not be sought by students of osmoregulation.
Difficulties associated with measurement of bacterial turgor pressure and cell volume, size, shape, and compartmentation are discussed in the Appendix. Although each of the applicable techniques has been used to estimate turgor pressure in bacteria, examinations of the turgor pressure of osmoregulating bacteria as a function of extracellular osmolality are rare. Studies of gas vesicle collapse in response to externally applied pressure suggested that the turgor pressures maintained by Microcystis sp. (230) and Ancylobacter aquaticus (215) cells decreased as a function of growth medium osmolality. Thus, turgor pressure might have been maintained above a minimum value, but it was not maintained at a unique "set point." Whatmore and Reed (294) used plasmolysis titrations to examine the recovery of turgor pressure after osmotic upshifts were imposed on growing B. subtilis cells. Cell volumes were estimated with the Coulter counter, and all observed volume change was attributed to the cytoplasm. Turgor pressure varied from 0.753 osmolal before the shift to 0.325, 0.489, and 0.757 osmolal at intervals immediately, 2 h, and 5 h after an osmotic upshift was imposed with 0.4 M NaCl. These results suggested that B. subtilis cells growing under these conditions do osmoregulate to achieve a turgor pressure set point. However, they do not support the generalization that B. subtilis cells behave in this way under all conditions or that all bacteria osmoregulate to maintain turgor pressure. Effects of growth medium osmolality on the size, compartmentation, and hydration of metabolically active bacteria offer some additional insight.
Structural responses of metabolically active bacteria to osmotic shifts. By applying the solute distribution technique to E. coli cells growing in the absence of osmoprotectants, Dinnbier et al. demonstrated transient decreases in cell and cytoplasmic water content (milliliters per gram of protein) in response to a 1-osmolal osmotic upshift imposed with NaCl (56). The cells recovered partially, reaching reduced steady-state water contents within approximately 10 min of the osmotic shift. Meury reported similar variations in cytoplasmic water content for E. coli (172). Analogous results were obtained when Skjerdal et al. applied inulin and sorbitol as probes to determine cellular and cytoplasmic hydration changes in Brevibacterium lactofermentum and C. glutamicum (the osmotic shift was imposed with 0.6 M NaCl), but no evidence was offered to validate this use of sorbitol (254). These observations suggest that if nutrients are provided, cells adapt within minutes to at least some effects of increased medium salinity on cell structure.
Meury et al. monitored culture turbidity, K+ uptake, DNA content, protein content, cell size, and cell concentration (Coulter counter) after E. coli cells (strains AB1157 [proA] and C600 [pro+]) were subjected to osmotic upshifts in minimal salts medium (171-174). They observed a transient increase in turbidity, rising within 2 to 3 min and reversing over approximately 30 min, for suspensions of growing E. coli cells subjected to large osmotic upshifts (up to 1.2 osmolar) imposed with NaCl or KCl in the absence of osmoprotectants (strain C600) or in the presence of osmoprotectant proline (strain AB1157). This transient was then followed by a sustained increase. The initial turbidity increase was probably related to cellular dehydration. Subsequent changes in turbidity were also related to changes in cell volume, shape, and concentration. Following an osmotic upshift (1.2 osmolar, applied with NaCl), K+ uptake began immediately as most DNA and protein synthesis ceased. After 40 min, K+ had reached an elevated, steady-state level as both DNA and protein synthesis resumed. The observed K+ uptake was mediated by the Trk transporter (175). Cell division was arrested and the mean cell volume increased steadily following the osmotic shift. Phase-contrast microscopy revealed that cell length doubled at constant cell diameter, so that the observed volume change was not due to a change in cell shape at constant surface area (171). Cell division resumed, at a reduced rate, only after the mean cell volume had doubled. The size of Staphylococcus aureus cells cultivated in a defined medium (0.2 osmolal) also increased as the osmolality was elevated 10-fold with NaCl, NaNO3, or KCl but not with sucrose, sorbitol, or glycerol (285). Increasing medium salinity was correlated with a decreased steady-state cell water content when Halomonas elongata and E. coli were cultivated in minimal salts media without osmoprotectants (for H. elongata, the media were supplemented with 0.05 to 3.4 M NaCl and data were expressed as microliters per milligram [dry weight] [288]; for E. coli, the media were supplemented with 0 to 0.65 M NaCl and the data were expressed as microliters per milligram of protein [38, 146, 233]). This was not true for L. monocytogenes, although high levels of errors may have obscured real reductions in that case (211). For E. coli, increased medium salinity was correlated with reduced cytoplasmic water content (38, 101, 146, 233) and increased periplasmic water content (microliters per milligram of protein) (38, 233). The hydration of E. coli ML cells as a function of medium osmolality was also investigated by density gradient ultracentrifugation. Cellular buoyant density increased as medium salinity increased for E. coli (0.005 to 2.0 osmolal) (10, 11) and Salmonella (0.3 to 2.0 osmolal) (9), indicating decreasing hydration. However, neither cell age (as indicated by cell size at constant osmolality and nutrient supply) nor growth rate affected buoyant density for E. coli (136). At constant diameter and periplasmic thickness, an increase in E. coli cell volume (or length, as discussed above) would reduce the fraction of the cell volume occupied by the periplasm by less than 1%. Cayley et al. (38) reported an increase in the periplasmic fraction of cell water from 15% after growth in 0.28-osmolal growth medium to 37% after growth in 1.02-osmolal growth medium. Such results would indicate a sustained, two- to threefold increase in periplasmic thickness for cells with the dimensions reported by Meury (171). Glycine betaine triggers further remodeling of bacterial cells under high-osmolality conditions. Meury et al. monitored the response to 1 mM glycine betaine of E. coli cells that had adapted to a high-osmolality medium (1.5 osmolar) (171-174). Following glycine betaine addition (and immediate uptake), the culture turbidity decreased and DNA synthesis accelerated as protein synthesis and cell division were attenuated. Glycine betaine attained a steady-state cytoplasmic level after 15 min. DNA synthesis accelerated further, and both protein synthesis and cell division resumed at elevated rates after 80 min. The mean cell volume fell steadily throughout this period, attaining a level near that in low-osmolality (0.3 osmolar) medium after 90 min. For E. coli cells cultivated in a minimal medium supplemented with 0.5 M NaCl (1.02 osmolar), the osmoprotectants glycine betaine and proline (1 mM) increased cytoplasmic hydration to approximately the levels observed for cells cultivated in the same medium supplemented with 0.2 M NaCl (0.47 osmolar) and 0.4 M NaCl (0.83 osmolar), respectively (39). The increase in size of S. aureus cells cultivated in a defined medium of high salinity was also reversed if the bacteria were provided with glycine betaine as osmoprotectant (285). These responses of S. aureus were related to salinity, not osmolality, and effects of salinity and osmoprotection on cell density were not reported. These observations can be summarized as follows. (i) The rate of macromolecular synthesis correlates with cytoplasmic hydration and K+ content, at least for E. coli. After an osmotic upshift, attainment of an elevated steady-state K+ and/or compatible solute level precedes the resumption of DNA and (most) protein synthesis. (ii) Steady-state cellular and cytoplasmic hydration vary inversely, whereas periplasmic (or cell wall) thickness or hydration and cell volume vary directly with growth medium osmolality, at least for some bacteria. (iii) The growth rate of E. coli is inversely correlated with growth medium osmolality (38). Since chromosome copy number is inversely proportional to growth rate for E. coli, both reduced copy number and increased cell volume would counter the effect of sustained cytoplasmic dehydration on DNA concentration in the cytoplasm of cells grown in high-osmolality media. These interpretations are consistent with the view that K+ and compatible-solute accumulation by osmoregulating bacteria are required to modulate nucleoid structure and facilitate macromolecular synthesis (228, 229). They also indicate striking effects of osmoadaptation on bacterial morphology and ultrastructure that warrant further investigation. Substantial changes in cell surface stress and strain are clearly associated with both transient and steady-state osmoadaptation, but these changes are not easy to define. The degree to which osmoregulating bacteria regain turgor pressure in the steady state is unclear.CYTOPLASMIC MEMBRANE-BASED OSMOSENSORS
|
|
|---|
Cytoplasmic membrane-based proteins are implicated in the earliest
bacterial responses to osmotic up- and downshifts (Table 5). Most mediate osmoregulatory
transmembrane solute flux; two are sensor constituents of
transcriptional regulatory systems. Two proteins, MscL and ProP, have
been shown to function alone, in proteoliposomes, as both osmosensors
and respondents to osmotic shifts. The stage is therefore set for the
further elucidation of membrane-based osmosensory mechanisms.
|
Cytoplasmic membrane localization of an osmosensor focuses the search for the stimulus that it detects. The array of possibilities is still large, however, particularly if sensory domains associated with the periplasmic and cytoplasmic faces of the membrane are included (Table 2). For systems that are functional, alone, in proteoliposomes, dependence on other cellular constituents (or their activities) can be ruled out. It will now be important to answer the following, overlapping questions. (i) Does each sensor protein detect changes in transmembrane solvent gradients or in absolute solvent osmolality? (ii) Does the sensor detect changes in solvent osmolality directly, or does it detect solvent-induced changes in the phospholipid membrane? Does the membrane act as an antenna? (iii) Does the sensor protein detect membrane changes that are mechanical and/or chemical in origin?
Since membrane enzymes, in general, are sensitive to membrane perturbation, the experiments that resolve these possibilities must be designed with particular care. For example, some membrane-based osmoregulatory systems are perturbed by amphipaths (e.g., procaine and tetracaine [see the examples below]). However, such compounds are pleiotropic in their impact on membrane structure and protein activity (see the reviews cited by Cantor [35]). Interpretation of amphipath effects in mechanistic terms will therefore require rigorous and painstaking dissection of coincident outcomes.
K+ Transporters of E. coli
The Trk and Kdp transporters can both be activated to mediate osmoregulatory K+ uptake by E. coli (2, 6, 7). Trk, which has a high KM for K+ (estimates of 0.3 to 3 mM), mediates K+ uptake by E. coli cells cultivated in media with K+ concentrations above approximately 1 mM. It is encoded in constitutively expressed genes that are dispersed on the chromosome, and it is unlike other transporters in structure. The KdpFABC transporter, a P-type ATPase with a low KM for K+ (2 µM), is responsible for osmoregulatory K+ uptake only by severely K+-depleted bacteria (2). Both Trk and Kdp (when present) are activated within seconds of an osmotic upshift.
K+ fluxes are primary and essential responses of E. coli cells to osmotic shifts. Since cytoplasmic K+ levels are directly correlated with extracellular osmolality (see the summary by Bakker [6]), cytoplasmic rehydration is usually assumed to be the objective of K+ accumulation. As outlined above, both osmotic upshifts and ensuing adjustments in the concentration of cytoplasmic K+ (and associated ions) influence nucleoid structure, cellular energetics, cytoplasmic ionic strength and ion composition, as well as cytoplasmic osmolality. K+ glutamate accumulation may specifically counter the effects of increased macromolecular crowding on nucleoid organization (229), and K+ is also implicated in energy metabolism. Some K+ accumulation occurs even in the presence of osmoprotectants, such as glycine betaine, which are more effective than K+ in restoring cellular hydration after an osmotic upshift. All these observations suggest that the adjustments in cytoplasmic ion composition (particularly the K+ level) which are triggered by osmotic shifts meet multiple objectives. If so, the enzymes that mediate these adjustments are likely to respond to multiple signals. Regardless of the validity of that prediction, the central role of K+ in cell physiology has rendered elucidation of the osmosensory mechanisms associated with K+ uptake particularly challenging.
Transporter Trk.
The homologous proteins TrkG (485 amino acids, encoded in the prophage rac region of the
chromosome) and TrkH (483 amino acids) are believed to serve as
alternative integral membrane subunits responsible for K+
translocation in E. coli. Although these proteins are
predicted to span the membrane 12 times, they are not related in
sequence to other transporters that share this topology. Both

H+ and ATP are
required for K+ uptake via the Trk system, but ATP is
believed to regulate rather than to drive K+ uptake.
Subunit TrkA (458 amino acids, corresponding to the SapG protein of
S. typhimurium [208]) exists as both
cytoplasmic and membrane-associated forms (26). Its
association with membrane-integral subunits TrkG and TrkH is required
for K+ uptake. Each half of TrkA includes a Rossman fold as
well as having sequence similarity to the NADH binding domain of an
NAD+-dependent dehydrogenase. TrkA has been demonstrated to
bind NAD+ and NADH, but ATP binding could not be detected
(250). These observations and the involvement of TrkA and
SapG in both K+ uptake and resistance to antimicrobial
peptides (208) imply that they play a regulatory role.
Transporter Kdp. Although it is best characterized in E. coli, the Kdp system is ubiquitous (reference 278 and references therein). The transport function of the Kdp-ATPase from E. coli is becoming well defined (2). Subunit KdpA is believed to span the cytoplasmic membrane 10 times and to translocate K+ in a process involving two sequentially occupied K+ binding sites (30). The catalytic subunit KdpB, also membrane associated, accepts phosphate from ATP during the K+ transport cycle (224, 253). The functions of essential subunit KdpC and hydrophobic peptide KdpF are unknown. K+ transport via the Kdp-ATPase has been demonstrated in cytoplasmic membrane vesicles provided with an ATP-regenerating system (130) and was shown to be electrogenic by an electrophysiological analysis involving black lipid membrane-associated proteoliposomes reconstituted with the purified enzyme (70). The mechanism by which osmotic upshifts activate the Kdp-ATPase is unknown, however.
Sensor kinase KdpD.
The kdpFABCDE operon
encodes the Kdp-ATPase (KdpFABC) and two-component regulatory system
KdpDE. An internal promoter mediates low-level kdpDE
transcription, but readthrough of kdpDE from the upstream
kdp promoter has also been observed (218, 286).
Altendorf and Epstein summarized the evidence that KdpD acts via the
phosphorelay mechanism characteristic of two-component systems
(2). Much effort has been expended to elucidate the basis
for transcriptional regulation of kdp operon expression from
the upstream promoter. Laimins et al. (141) first used
expression of
-galactosidase by bacteria containing a
kdpA::lacZ fusion to demonstrate that transcription of kdpFABC responded to both low
K+ concentrations and increased osmolarity. It is now well
established that the K+ transport phenotype of the bacteria
determines the threshold K+ concentration below which
kdp transcription is observed. That threshold is
approximately 5 mM for bacteria that cannot take up K+ via
the KdpFABC transporter (Trk+ Kdp
) and 50 mM
for bacteria unable to take up K+ via either transporter
(Trk
Kdp
) (141). Frequently,
kdp transcription is measured by using a kdp::lacZ fusion in bacteria that are
phenotypically Trk
and/or Kdp
.
Trk+ and Kdp
Trk
bacteria
(4, 83, 141, 267, 269). This characteristic distinguishes
KdpD from other osmosensory systems. It implies that an aspect of the
response to an osmotic upshift imposed with nonionic cosolvents quickly
reverses or overrides the initial stimulus due to elevated
extracellular osmolality whereas that stimulus is maintained in the
steady state when osmotic stress is applied by adding ionic cosolvents.
Studies of osmoregulation are usually, appropriately, focused on
cellular responses that are neither electrolyte nor non-electrolyte
specific. The different responses of the kdp system to ionic
and nonionic cosolvents suggest that elucidation of the sensory
mechanism for KdpD requires the opposite focus.
The fact that organic osmoprotectant uptake attenuates the
transcription of the osmoresponsive loci proP and
proU, but not that of the kdp locus, also
contradicts a model in which turgor pressure alone controls
kdp transcription. Like K+ uptake,
osmoprotectant uptake is usually assumed to restore turgor pressure.
Finally, Sugiura et al. (266) isolated kdpD
mutations that caused K+-insensitive kdp
transcription. Diverse ionic and nonionic cosolvents induced
steady-state kdp transcription by the mutant bacteria. This
result suggested that K+ and osmotic changes exert their
opposing effects on kdp transcription, through KdpD, via
distinct mechanisms.
The role of turgor pressure in osmosensing by kdp has been
debated at length. Nevertheless, bacterial turgor pressure is difficult to measure and hence ill defined. Perhaps most open to question is the
assumption that osmoregulatory K+ uptake, with or without
compatible-solute accumulation, restores turgor pressure (to levels at
or below that prevailing before the stress). Osmosensors are unlikely
to detect turgor pressure (intracellular hydrostatic pressure)
directly, not least because bacterial turgor pressures are much lower
than pressure changes that are known to influence protein conformation
and enzyme activity in vitro (239). Indeed, structural
correlates of turgor pressure changes that could be sensed by KdpD have
been proposed (47). Purification, reconstitution, and
mutagenesis are now providing experimental systems that will support
the evaluation of these alternatives (Table
6).
|
392-530) (225), in contrast to
earlier results (195, 196). Deletion analysis indicated that
at least the first 128 residues of the N-terminal domain and the
membrane domain of KdpD are implicated in its sensory capability.
The KdpD-KdpE phosphorelay detected in vitro requires transfer of
phosphate from ATP to a KdpD protein domain that is cytoplasmic in vivo
and then ultimately to KdpE. The expectation that the cytoplasmic
domains of KdpD must be exposed on the external surface of both
membrane vesicles and proteoliposomes (to allow access to
exogenous ATP and KdpE) was confirmed by protease susceptibility (112). Current in vitro analyses of the phosphorelay
therefore are performed with systems that are topologically inverted in comparison with the intact cell. Some efforts have been made to determine the dependence of the KdpD-KdpE phosphorelay on
K+ and cosolvents. These experiments, described below, have
involved (often simultaneous) variation of luminal and exogenous
K+ concentration, transmembrane K+ and
Na+ gradients, intra- and extraliposomal ionic strength,
and intra- and extraliposomal osmolality.
Using membrane vesicles, Voelkner et al. (286) found KdpD
phosphorylation to be absolutely dependent upon the presence of both
divalent (Mg2+ or Ca2+) and monovalent
(Na+ or K+) cations. At 0.05 M salt, the
phosphorylation level attained with KCl exceeded that attained with
NaCl. In contrast, 0.5 M NaCl elicited a higher KdpD phosphorylation
level than did 0.5 M KCl. Sucrose did not substitute for NaCl or KCl in
this reaction. The levels of KdpE phosphate attained upon addition of a
cytoplasmic extract containing KdpE corresponded to the available KdpD
phosphate. Solvent effects on the phosphotransfer and phosphatase
reactions were not differentiated from those on KdpD autophosphorylation.
Nakashima et al. (195, 196) measured KdpD
autophosphorylation and KdpD-KdpE phosphotransfer in the presence of
added KCl or NaCl (0 to 400 mM) with proteoliposomes prepared in the
presence of 0, 100, or 200 mM KCl and with partially purified KdpD (25 mM Tris HCl as the base buffer). Autophosphorylation and
phosphotransfer appeared to be independent of the luminal (the
equivalent of periplasmic) K+ concentration (and the
resulting ionic and osmotic gradients) in this range (exogenous
K+ at 100 mM). Phosphorylation of KdpE was a function of
exogenous salt concentration (NaCl or KCl; no salt was added during
reconstitution), increasing steadily in the range from 50 to 400 mM.
Only net KdpE phosphorylation, the outcome of the combined in vitro
kinase, transferase, and phosphatase reactions, was measured during
these experiments. Salts also stimulate the phosphorylation of the
response regulator OmpR by the sensor kinase EnvZ, a system that also
responds to osmolality and other stimuli.
Procaine, an amphipathic local anaesthetic, enhanced kdp
transcription in E. coli, but this effect was observed only
in strains expressing K+-insensitive KdpD variants with
altered membrane domains (266). Procaine and chlorpromazine
were also observed to stimulate the phosphorylation of the response
regulator OmpR in a process that required the membrane domain of the
sensor kinase EnvZ. Like the effects of salts, the effect of procaine
on EnvZ was attributed to inhibition of phospho-OmpR phosphatase
(277).
Much remains to be learned about the signal(s) sensed by KdpD and its
sensory mechanism(s). Unlike the ProP transporter (see below), KdpD
does not respond clearly to medium osmolality once it is purified and
reconstituted in proteoliposomes. Alternative interpretations of the
above observations include the following. (i) The osmotic response of
KdpD has not been reproduced in vitro because KdpD senses turgor
pressure, which has not yet been imposed in vitro. (ii) For wild-type
KdpD, the response to osmotic shifts is often obscured by the operation
of other regulatory mechanisms related to K+ levels, energy
metabolism, or nucleoid structure. The isolation of KdpD derivatives
insensitive to those inputs will allow further elucidation of the
osmotic response (Table 6). (iii) KdpD senses changes in cytoplasmic
ionic strength as a manifestation of extracellular osmotic shifts. The
salt dependence observed in vitro represents at least one of the
regulatory mechanisms operative in vivo. (iv) KdpD, in vitro, does not
show the osmotic response characteristic of whole bacteria, because
protein or other macromolecular constituents of the periplasm or
cytoplasm are absent from the in vitro systems. Such constituents might
act on KdpD specifically or collectively (through macromolecular
crowding). (v) Finally, KdpD does not respond to osmotic changes in
vitro because the topology of the in vitro systems is opposite to that
of the intact cell. As a result, the in vitro systems fail to reproduce
mechanically induced changes in membrane strain that are sensed in vivo.
Osmoprotectant Transporters
Some bacterial osmoprotectant transporters, including both ABC transporters and ion symporters, are activated by an increase in salinity in the absence of protein synthesis. In some cases the osmotic origin of this phenomenon has been confirmed by demonstrating analogous responses to structurally dissimilar cosolvents, both ionic and nonionic (Table 4). The purified E. coli transporter ProP has now been shown to function as both an osmosensor and an osmoregulator (226). The rationale for the accumulation of organic cosolvents (osmoprotectants) in response to osmotic upshifts appears simple: these cosolvents are preferentially excluded from macromolecular surfaces. Recent research suggests that the related sensory mechanisms are also relatively simple. Analysis of the osmotic activation mechanism is most advanced for ion symporters from Listeria monocytogenes, Corynebacterium glutamicum (BetP), and E. coli (ProP).
Glycine betaine uptake by L. monocytogenes. Glycine betaine uptake by L. monocytogenes cells was activated by both osmotic upshifts (124, 283) and reduced temperature (optimum, 7°C) (124). Although the dependence of uptake activity on the magnitude of the osmotic shift and on cosolvent chemistry was not defined, it increased within 2 min after an osmotic upshift and was maximal within 4 min (124). Osmotically activated glycine betaine uptake was also observed with cytoplasmic membrane vesicles. Glycine betaine uptake was absolutely Na+ dependent, and the initial rate was optimal when an osmotic upshift was imposed with 0.4 M NaCl (79). Both the fold stimulation of the uptake rate and the osmotic upshift yielding that rate were cosolvent dependent. KCl and sucrose stimulated the initial rate of glycine betaine uptake three- and sixfold when optimal osmotic upshifts of 0.64 and 0.28 osmolal, respectively, were imposed on vesicles in a medium containing 50 mM Na+ to meet the requirement for Na+ as a coupling ion. (In the presence of sucrose, the KM for Na+ was 75 mM.) Although the kinetics of osmotic activation were not defined, transport proceeded after a lag of approximately 4 min following exposure of the vesicles to a respiratory electron donor and an osmotic upshift. More recent data indicate that the cold-activated glycine betaine uptake activity observed in whole cells was attributable to a second glycine betaine transport system that is also osmotically activated (124a, 256).
Transporter BetP of C. glutamicum. An absolute dependence on NaCl (optimum concentration, 0.625 M) was observed for glycine betaine uptake by cells of C. glutamicum cultivated in a complex, high-osmolality medium (brain heart infusion supplemented with 0.5 M NaCl) and washed with a cold, low-osmolality buffer (69). Most of this uptake activity (approximately 90%) was attributable to a Na+/glycine betaine symporter (KM for Na+, 4 mM) encoded in the betP locus (213). Upon expression in an E. coli strain lacking endogenous glycine betaine transporters, BetP activity was optimal when an osmotic upshift was imposed with 0.2 M NaCl. However, these bacteria were cultivated in minimal medium at low osmolality and not subjected to a cold, low-osmolality wash prior to the uptake assay. BetP was activated without a measurable lag when it was expressed in either C. glutamicum or E. coli (213).
BetP (595 amino acids), predicted to span the cytoplasmic membrane of C. glutamicum 12 times, is similar in sequence to the choline transporter BetT and the putative carnitine transporter CaiT of E. coli and to the glycine betaine transporter OpuD of B. subtilis (Table 4). Like BetP, BetT and OpuD catalyze osmoprotectant uptake and are activated by an osmotic upshift. CaiT is implicated in anaerobic carnitine catabolism and has no known relationship to osmoadaptation. (Osmoprotection of E. coli by L-carnitine [212] is eliminated by a proP defect [160].) The hydrophilic N-terminal sequence of BetP is predicted to be anionic and longer than those of BetT and OpuD; the C-terminal sequence is predicted to be cationic. Peter et al. (214) examined BetP activity by expressing the transporter from a plasmid in a betP derivative of C. glutamicum. Uptake measurements were performed in the presence of ectoine to suppress a residual glycine betaine uptake activity that, unlike BetP, mediates ectoine uptake. The measured Vmax was approximately one-third of that attributable to BetP in wild-type bacteria. The amphipathic local anesthetic tetracaine stimulated BetP activity in a manner dependent upon both medium salinity (NaCl added to attain osmolalities of 400, 600, and 1000) and tetracaine concentration, with the optimal tetracaine concentration being in the range 0.6 to 0.8 mM. Peter et al. (214) also examined the effects of N- and C-terminal deletions on BetP activity. Since the effects of these deletions on protein expression were not assessed, the impact of the mutations on absolute transporter activity could not be analyzed. For variant transporters with sufficiently high activity to support reliable determinations (all but two), the KM for glycine betaine did not differ from that of the wild-type. Deletion of 20, 32, 49, or 60 N-terminal residues yielded bacteria that retained glycine betaine uptake activity but required a larger osmotic upshift than did the wild type for maximal activation (1.4 M and 0.6 M NaCl, respectively). Deletion of 12, 23, or 32 C-terminal residues yielded glycine betaine uptake activity that was insensitive to osmotic shifts. Transport activity was stimulated by NaCl (up to 0.25 M), reflecting the requirement for Na+ as a coupling ion, but it was not stimulated by sorbitol. Deletion of 23 or 32 C-terminal residues also reduced the affinity of the transporter for Na+. Deletion of 52 C-terminal residues inactivated the transporter. Thus, both N and C termini are implicated in the sensory mechanism of BetP. Recent evidence suggests that some transporters are subject to trans inhibition, i.e., inhibition by substrates previously accumulated within the cytoplasm (220, 223, 259, 283). trans inhibition of transport may act physiologically to limit compatible-solute accumulation. Since an osmotic upshift can override this inhibition for some systems, Poolman and Glaasker (220) suggest that modulation of the transporter-substrate interaction at the cytoplasmic membrane surface may also constitute an osmoregulatory mechanism. trans inhibition of glycine betaine uptake (by glycine betaine) was observed in C. glutamicum cells expressing wild-type BetP but not in those expressing the variant lacking 23 C-terminal residues (214). Thus, both the cytoplasmic glycine betaine level and extracellular osmolality may regulate BetP.Transporter ProP of E. coli. The ProP transporter of E. coli catalyzes H+/osmoprotectant symport (160). ProP was activated with a half time of approximately 1 min when E. coli cells or cytoplasmic membrane vesicles were subjected to osmotic upshifts imposed with NaCl or sucrose but not with glycerol (84, 179). A much larger osmotic upshift was required to elicit maximal activity in vesicles (0.8 osmolal) than in cells (0.2 osmolal), however (162). Exogenous K+ is required for full expression of ProP activity in intact cells of both S. typhimurium (131) and E. coli (162).
Overexpression of ProP and the addition of six C-terminal histidine residues (a His tag) facilitated the purification of the transporter and its reconstitution in proteoliposomes (226). Neither the KM of the transporter for proline nor its osmotic activation (in cells) was altered by this addition. ProP activity in proteoliposomes was absolutely dependent upon the imposition of a membrane potential (lumen negative) and an osmotic upshift. NaCl or sucrose (but not glycerol) was effective as a cosolvent. A further stimulation of uptake was observed when a pH gradient (lumen alkaline) was imposed. In contrast, an osmotic upshift imposed with sucrose inhibited the activity of the Na+/proline symporter PutP, which was purified and reconstituted under the same conditions. (PutP is implicated in proline catabolism by E. coli but not in the osmotic stress response.) Thus, proteoliposomal ProP alone acts as both an osmosensor and an osmoregulator. Since the imposition of a membrane potential, in this system, required luminal K+, it has not yet proven possible to further evaluate the role of K+ in ProP activity in vitro. ProP (500 amino acids) is a member of the major facilitator superfamily and is most closely related in sequence to OusA of Erwinia chrysanthemi (498 amino acids, 93.6% similarity to ProP). Plasmid-borne ousA restored osmoprotection by glycine betaine, proline, and ectoine to an E. coli strain deficient in the ProP and ProU transporters. Although the corresponding uptake activities were observed, they were not stimulated when bacteria cultivated in low-osmolality medium were exposed to an osmotic upshift (0.5 M NaCl). This failure to observe OusA activation may have resulted from expression in a heterologous host or from the magnitude of the imposed osmotic shift. For ProP in E. coli cells, activity is optimal when an osmotic upshift is imposed with 0.2 M NaCl and fully inhibited at 0.5 M NaCl. Citrate and
-ketoglutarate transporters from E. coli and
other organisms, none of which are implicated in the osmotic stress response, show significant but lower similarity to ProP and OusA (approximately 30%). Given the absence of structural detail for this
class of proteins, no structural basis for osmosensing by ProP is
obvious from comparisons of their (putative) membrane integral domains.
However, the central hydrophilic loops of ProP and OusA (between
putative transmembrane domains 6 and 7) are predicted to be longer than
those of the ProP homologues Cit, Ciu1, and KgtP (formerly WitA)
(50, 82).
PhoA fusion analysis has placed the hydrophilic loop between
transmembrane domains 11 and 12 of the
-ketoglutarate transporter KgtP in the periplasm of E. coli (252).
Immunochemical analysis of membrane vesicles by using antibodies raised
against a C-terminal peptide suggests that the C terminus of ProP is
cytoplasmic, as is observed for other members of this transporter
superfamily (162). Comparison of the topologies of ProP in
cells and proteoliposomes is an immediate priority. ProP and OusA are
distinguished from the related anion transporters by possessing a
carboxyl-terminal extension comprising six to seven of the heptad
repeats characteristic of
-helical coiled-coil-forming proteins
(50, 82). Culham et al. (50) therefore proposed
that the C-terminal extension of ProP might be involved in its osmotic
activation. This hypothesis is attractive since solvent composition
might be expected to influence the stability and/or conformation of an
-helical coiled-coil and/or its interaction with the membrane
surface (see "Solvent-membrane interactions" above). No general
coiled-coil-based mechanism can exist, however, since other osmotically
activated transporters (e.g., BetP) are devoid of this structural motif.
A peptide replica of the ProP C terminus can form a homodimeric
coiled-coil in vitro (278a). A ProP variant lacking 26 C-terminal amino acids is expressed at wild-type levels but is
inactive, regardless of the growth medium or assay medium osmolality
(50a). Thus, the C terminus of ProP has the potential to
mediate homodimer formation and is critical for ProP activity. Further
experimentation is required to determine whether coiled-coil stability
is correlated with osmotic activation of ProP and whether the C
terminus of ProP or OusA participates in homo- or heteromeric
coiled-coil formation in vivo.
A Tn5 insertion in the distal locus proQ impairs
ProP activity but does not reduce ProP expression (139,
181). The proQ defect eliminates ProP activity in
bacteria cultivated in low-osmolality media, reduces by 5-fold the
magnitude of the ProP activity attained after an osmotic upshift, and
decreases the rate of ProP activation (the activation half time is
increased 2.6-fold). ProQ (232 amino acids) is a cytoplasmic,
hydrophilic protein (139). Since ProP alone can act as an
osmosensor, ProQ must function to fine-tune that response and/or link
ProP activation to other cellular processes. The magnitudes of the
osmotic shifts eliciting maximal ProP activity in cells and membrane
vesicles differ. While ProP is active without an osmotic shift in cells
cultivated in low-osmolality media, proteoliposomes and membrane
vesicles are devoid of ProP activity unless an osmotic upshift is
imposed. These observations indicate that ProP can exist in fully
inactive and active states and that the status of the signal sensed by
ProP differs in intact bacteria and isolated membranes. This may
reflect the absence, in the vesicle systems, of structural linkages
present in whole bacteria.
Complex signal transduction cascades have now been shown to mediate the
responses of many cells, both prokaryotic and eukaryotic, to
environmental stimuli. On that basis, it may seem surprising that a
molecule with the apparent structural simplicity of ProP can both sense
and respond to osmotic shifts. Halophiles possess macromolecules that
are designed to function in high-salinity environments. Perhaps ProP
(like some E. coli promoters) represents a class of E. coli molecules that are designed to function when the cells face
environments with low water activity.
Mechanosensitive Channel MscL of E. coli
Although mechanosensitive channels have been implicated in the cosolvent efflux that occurs when bacteria are subjected to osmotic downshifts, the evidence linking specific channels to specific efflux processes remains limited (see "Cosolvent efflux" above). Recent evidence suggests that MscL, a mechanosensitive channel with low ion selectivity and high conductance, opens in response to mechanically imposed membrane stress or osmotic shifts and mediates K+ efflux from E. coli cells. Only references of particular significance for osmosensing are cited below since MscL has been the subject of recent reviews (75, 268).
Although mscL null mutants are without phenotype under conditions examined to date, Blount et al. (20) showed K+ leakiness and slow growth in bacteria harbouring mscL mutations K31D and K31E. Both phenotypes were reversed during cultivation of the bacteria in a high-osmolality medium. In addition, an osmotic downshift elicited greater K+ loss from bacteria expressing the variant channels than from those expressing the wild-type channels, and patch clamp analysis revealed that the variant channels shared increased sensitivity to mechanical stress. This evidence implicates MscL in osmoadaptive K+ efflux but does not indicate whether it also mediates the efflux of other ions or nonionic cosolvents. Multiple mechanosensitive channel conductances have been detected in E. coli, but the E. coli chromosome encodes no MscL paralogues. (MscL homologues have been predicted in other organisms, however.)
MscL appears to detect osmolality changes indirectly as changes in mechanically imposed membrane stress. The presence of MscL in the cytoplasmic membrane of E. coli and in proteoliposomes reconstituted with the purified protein is correlated with the presence of a mechanosensitive conductance detected by patch clamping. The channel is not ion selective, and its conductance is high (2.5 nS in the presence of 0.2 M KCl and 0.04 M MgCl2). Voltage-dependent subconducting states are observed. The relationship between the channel-open probability and the applied pressure follows the Boltzmann distribution.
If it is determined by lateral membrane stress, the channel-open probability will be more sensitive to an imposed pressure for patches with large radii of curvature (see equation 11) (86). According to a simple two-state (open/closed) channel model, the following relationship would be expected:
|
(13) |
AC is the stress-induced increase in channel
area in the plane of the membrane (the channel strain),
T
AC is the work done to effect that
expansion,
G is the free energy of the channel transition
from the closed to the open state in the unperturbed membrane, and
k is the Boltzmann constant. This relationship is now being
applied to data correlating channel-open probability with patch
curvature and applied pressure to yield estimates for the parameters
AC and
G. This effort is
required to further test the assertion that mechanically imposed lateral stress gates MscL and to define stress-strain relationships for
the channel in comparison to its host membrane.
The pressure required to activate channel conductance was reduced when various amphipaths (either cationic [e.g., procaine and chlorpromazine] or anionic [e.g., trinitrophenol]) were added to the solution bathing the cytoplasmic surface of excised E. coli membrane patches (163). The effects of chlorpromazine and trinitrophenol on patch conductance were compensatory. The authors assumed that the detected channels were located in the outer membrane and that the amphipaths partitioned into different membrane leaflets because of membrane lipid asymmetry. On that basis, they suggested that amphipaths potentiate channel opening by selectively expanding one membrane monolayer and imposing membrane bilayer curvature.
It is now clear that mechanosensitive channels are located in the cytoplasmic membrane of E. coli, which has unknown lipid asymmetry, and that channel MscL, at least, can function in the absence of bulk-phase, transverse lipid asymmetry. Recent evidence suggests that cosolvents and amphiphiles may exacerbate or compensate for the lateral pressure that creates intrinsic strain in membrane bilayers (61, 153, 161) (see "Solvent effects on membrane structure" above). The degree to which they exert these effects may depend on their molecular size, shape, and charge and hydrogen-bonding capacity as well as on membrane properties. The response of proteoliposomal MscL to amphipaths has not yet been reported. Their use may offer a means of testing whether both mechanically and chemically imposed membrane perturbation can activate this channel.
MscL is a homohexamer composed of a 136-amino-acid, largely
-helical
protein that crosses the cytoplasmic membrane twice, with a small
periplasmc loop (approximately residues 50 to 69) and cytoplasmic N and
C termini (approximately residues 1 to 15 and 111 to 136, respectively). Although the MscL carboxyl-terminal sequence (residues
104 to 136) is conserved among MscL homologues, its deletion failed to
alter the mechanosensitivity, unit conductance, or kinetics of the
channel. These characteristics were very sensitive to N-terminal
modifications, however. Point mutations that alter channel properties
are now being described. Changes in the channel properties of variants
with mutations at Q56 were correlated with changes in patch-clamping
bath composition in a manner that substantiated its periplasmic
location. Mutations K31D and K31E, predicted to fall within the
N-terminal transmembrane domain of MscL, yielded channels with enhanced
sensitivity to mechanical stress (20).
The following questions regarding osmosensing and osmoregulation by MscL can now be addressed: (i) What role does MscL play in the osmotic stress response of E. coli? Does it mediate fluxes of both ionic and nonionic cosolvents? If so, is it selective? (ii) How do voltage, membrane stress, and solvent composition influence the open probability of MscL? Can it respond to both mechanically and cosolvent-induced membrane stresses? (iii) Can MscL substates (defined electrophysiologically) be correlated with structural perturbations of MscL to map the process of channel gating? (iv) What is the nature of the protein-protein and protein-lipid interactions that allow MscL channels to open at a membrane stress insufficient to cause (presumably less specific) solute leakage via the membrane lipid phase (see, e.g., references 66 and 94)? How does channel opening depend upon changes in MscL secondary, tertiary, and quaternary structures?
CONCLUSION
|
|
|---|
Analyses of solvent-macromolecule and solvent-membrane interactions have revealed mechanisms by which osmosensors might detect changes in solvent osmolality, either directly or through their impact on cell structure. If different forms of a sensor ("off" and "on") interact differently with solvent, a change in solvent composition can trigger a change in sensor form (Fig. 2 to 4). In principle, an osmosensor could detect changes in water activity and hence lack cosolvent specificity. In practice, however, bacterial osmosensors may be designed to detect collective changes in the intracellular concentration of individual or chemically similar cosolvents that result from changes in extracellular osmolality. Examples of such cosolvents (or cosolvent groups) might include (i) cosolvents that elevate cytoplasmic ionic strength, (ii) cosolvent molecules that interact differently with the surfaces of the "off" and "on" conformations of the osmosensor, (iii) cosolvent molecules large enough to be sterically excluded from the osmosensor surface or from solvent-filled cavities within the osmosensor, and (iv) cosolvent molecules large enough to effect macromolecular crowding. One or more of these principles may also underlie osmotic induction of genes or operons which occurs without the participation of locus-specific trans-acting regulatory elements (e.g., proP and proU [Table 3]).
Osmotic shifts elicit dramatic changes in bacterial cell structure. It is therefore reasonable to suppose that some osmosensors may be designed to detect these structural changes. Since it is difficult to precisely describe the effects of osmotic shifts on turgor pressure and on structural elements within intact cells, it is not currently possible to deduce osmosensory mechanisms by whole-cell experimentation. The cytoplasmic membrane is clearly a primary osmosensory locus (Table 5). Purified proteins ProP and MscL of E. coli, both cytoplasmic membrane constituents, respond to osmotic shifts and mechanical stimuli, respectively, when incorporated in proteoliposome systems in vitro. These experimental systems can now be exploited to further define the signal detected by each osmosensor, the resulting structural change in the osmosensor, and the role of the membrane. Further analysis of these sensory mechanisms may also offer new insights into the disposition of the cytoplasmic membrane, in vivo, and its perturbation by osmotic shifts. For example, indications that cosolvent accumulation by intact cells is a net consequence of transporter-mediated uptake and mechanosensitive channel-mediated leakage suggest that at least some regions of the cytoplasmic membrane in intact cells experience mechanically imposed membrane strain.
Students of membrane biophysics have predicted that variations in membrane strain modulate the activities of membrane enzymes (85). Membrane-based osmosensors (e.g., ProP and MscL) will now be used as probes to test that prediction. Just as the corpus of research on membrane physical properties will now serve as a resource to students of osmosensing, studies of osmosensory mechanisms may reveal which membrane properties make physiologically significant contributions to membrane strain.
APPENDIX
|
|
|---|
Correlation of osmoregulatory responses with changes in turgor pressure, volume, and compartmentation for bacterial cells is a primary goal of research on osmosensing. This Appendix summarizes techniques that may be applicable to this problem and offers comments on their limitations.
Measurement of Turgor Pressure
The available techniques for the detection and monitoring of turgor pressure include (i) direct monitoring of individual cells with a microscopic pressure probe (102), (ii) cytoplasmic freezing-point analysis of whole cells (187), (iii) analysis of the relationship between extracellular osmolality and the pressure-induced collapse of cytoplasmic gas vesicles (154, 215, 216, 290), (iv) comparison of the osmolalities of extracellular media and corresponding cell extracts (260), and (v) analysis of the relationship between cell volume and extracellular osmolality (the plasmolysis titration) (200, 294).
Techniques i and ii have so far been applied only to the large cells of plants, algae, and fungi. It remains to be determined whether bacterial cells sufficiently large to admit pressure probes (for technique i) or to accommodate the necessary microscopic analysis (for technique ii) can be created through genetic manipulation and/or antibiotic treatment. Technique iii is applicable only to the limited array of organisms (Bacteria and Archaea) that construct gas vesicles. The recent expression of Bacillus megaterium gas vesicles in E. coli (154) suggests that it may be used more widely. Pinette and Koch (215, 216) applied the gas vesicle technique to Ancylobacter aquaticus cells to test the hypothesis that turgor pressure would vary during the cell cycle for these gram-negative rods. Their results suggested that the cell wall was elastic and that cells varied quite widely in turgor pressure but revealed no systematic correlation between turgor pressure and cell size (age). It remains to be determined whether this technique will permit the evaluation of osmoregulatory turgor pressure modulation. Difficulties to be overcome include the variability of collapse pressure among gas vesicles and among cells, as well as the sensitivity of collapse pressure to postharvesting changes in the bacteria. Techniques iv and v can be applied to all cells. Turgor pressure estimates obtained by techniques i to iii are independent of cell volume estimation and assumptions regarding cell surface properties (discussed above), whereas those obtained by techniques iv and v are not. As a result, the estimation of cell volume and subcellular compartmentation assumes particular importance for studies of osmosensing.
The cell volume within which turgor pressure exists is, of course, that bounded by the cell surface layer upon which turgor pressure acts. If the cell surface can be assumed to constitute a single semipermeable layer (as is usually assumed for gram-positive bacteria), the relevant volume is that of the cytoplasm. For certain euryhaline algae and plant cells, the vacuole has been considered the relevant compartment since the cytoplasm constitutes a thin layer of relatively constant volume underlying the cell wall (89). Cells that include multiple semipermeable surface layers (e.g., gram-negative bacteria) are composed of concentric compartments which may differ in hydrostatic pressure. It has been assumed that the periplasm and cytoplasm have the same osmolality. This interpretation was consistent with one set of measurements performed on S. typhimurium cells cultivated in a low-osmolality medium (260). It has not been widely tested, however. On the basis of this interpretation, the cytoplasm and periplasm would experience equal turgor pressure, and this turgor pressure would be exerted on the outer membrane!
Application of technique v (the plasmolysis titration) is based on the assumption that as the extracellular osmolality is elevated, the turgor pressure is reduced to zero. Beyond this point, the cell (cytoplasmic) volume adjusts according to equation 2, with the cytoplasmic membrane acting as a fluid surface with high elastic modulus (k) and constant surface area. Thus
|
(14) |
VNO on the
reciprocal of extracellular osmolality is taken as indicative of this
behavior. Since intra- and extracellular osmolalities must be equal
when turgor pressure is absent, intracellular osmolality is read off such plots and corrected for the difference between the corresponding osmotic volume (Vcell
VNO) and the estimated osmotic volume of
unplasmolyzed cells. Cells are usually deprived of nutrients to prevent
metabolic activity from altering intracellular osmolality or other
cellular properties during the plasmolysis titration.
Measurement of Cell Volume and Compartmentation
Available techniques for the measurement of cell volume and compartmentation include (i) light and electron microscopy, (ii) determinations of the conductance of cell suspensions (with the Coulter counter or analogous instrumentation) (134, 137), (iii) (comparisons of the distributions of H2O and solutes within cell suspensions (260), and (iv) examinations of light scattering by cells and subcellular fractions (93, 128, 282). Technical limitations associated with each technique are discussed in the cited references, and issues of particular importance for studies of osmosensing are covered below.
Estimation of cell volume with the Coulter counter, a process developed by Kubitschek and colleagues (134, 135), depends upon comparison of electrical current interruption by cells and by particles of known size, suspended in a liquid electrolyte, as they pass through a small orifice. It is based on the assumption that current does not pass through the periplasm or cytoplasm. Kubitschek and Friske (137) demonstrated that for E. coli cells from exponential- and stationary-phase cultures, mean cell volumes estimated with the Coulter counter and by [14C]inulin exclusion (see below) were the same. This technique is relatively noninvasive and can provide rapid estimates of total cell volume. It is important to note that such cell volume estimates may be cell shape dependent, an issue of particular importance if cells compared in this way are likely to differ in shape as well as size.
Measurements of the relative distributions of water and solutes within cell suspensions yield estimates of total cell water (Wcell), periplasmic water (Wperi), cytoplasmic water (Wcyto), and hence the distribution of cell water between the cytoplasm and periplasm (subcellular compartmentation). Such measurements are based on the assumption that tritiated water equilibrates with all cellular water whereas other (usually 14C-labelled) hydrophilic solutes are physiologically inert and are excluded from particular cellular compartments only on the basis of their molecular size. Large, polymeric solutes (e.g., dextran, inulin, or PEG) are assumed to be excluded by the cell wall, and certain small, hydrophilic isolates (e.g., stachyose, sucrose, taurine, sorbitol, or mannitol) are assumed to penetrate the periplasm but to be excluded from the cytoplasm. Clearly, these assumptions must be justified experimentally for each solute-organism pair. Once water and solutes have equilibrated with a bacterial suspension, it is centrifuged, and the recovery of each solute in the pellet and supernatant is then compared to calculate, by difference, the volume of water associated with each cell compartment. Rottenberg (238) and Kashket (117) discussed this approach to the estimation of cytoplasmic water in a bioenergetic context.
Cayley et al. (38) extended this technique to determine the proportions of cell volume occupied by molecules other than water. Recognition of this issue is important since, given the large contributions of macromolecules to the volumes of cellular compartments (discussed above), estimates of water content cannot be taken as volume estimates for the corresponding compartments. By using cytoplasmic water as an estimator of cytoplasmic volume during plasmolysis titrations, researchers assume that all cytoplasmic volume changes result only from osmotically induced water flux across the cytoplasmic membrane. They thereby neglect possible changes in hydration of cytoplasmic molecules and in the accessibility of water to the probe solute.
The water contents of cells and their compartments, estimated by solute exclusion, are usually reported per unit cell mass or cell protein, not per cell. They thus provide population estimates, not "cell" estimates. Important information may be lost and erroneous conclusions may be drawn when populations which differ in cell shape and size (or shape and size distribution) are compared. It would therefore be helpful if these measurements were routinely combined with enumeration of cells and/or estimation of cell size and shape distributions (see "Osmoregulation, turgor pressure, cell growth, and cell division" above).
Two additional issues must be addressed if the solute exclusion
technique is to be used effectively during studies of osmoadaptation. First, concentrated cell suspensions (cell slurries) are often used and
cells are recovered as pellets to ensure that the errors in the
required difference measurements are acceptably low. Slurries and
pellets composed of respiration-competent bacteria are inevitably anaerobic and often nutrient limited. This may be desirable if the goal
is to estimate the properties of "resting" cells, but efforts must
be made to demonstrate whether changes in cell structure and physiology
pertinent to osmoadaptation have occurred during such sample
preparation. (For example, using taurine as probe, Castle et al.
[37] measured cytoplasmic volumes of 1.25 µl
· mg [dry weight]
1 and 1.8 µl · mg [dry
weight]
1 for respiring and glycolyzing E. coli cells, respectively.) On the other hand, measurements may be
made on metabolically active cells from dilute cell suspensions if they
are recovered by centrifugation through silicone oil (see, e.g.,
reference 56).
Second, difficulties arise if assumptions regarding solute distribution are not justified. In addition to its size, the chemical nature of the probe solute may be important. For example, if solutes are accumulated in or excluded from macromolecule-associated water (see below), the volume associated with that water will be incorrectly attributed. If a solute (or a contaminant) is not metabolically inert but, rather, is accumulated in or excluded from the cytoplasm, the water content of the cytoplasm will be under- or overestimated and the water content of the periplasm will be over- or underestimated, respectively. For example, contrary to early assumptions, taurine is a low-affinity substrate for the osmoregulatory transporter ProP of E. coli (167). ProP is constitutive, it is activated at a biochemical level by osmotic upshifts, and expression of proP is also induced when the bacteria are cultivated in high-osmolality media. Although ProP will not mediate active solute uptake, it may facilitate solute entry into the cytoplasm in deenergized bacteria. Clearly, efforts must be made to validate the assumption of passive solute distribution into only the expected cellular compartment(s) when this technique is applied for the first time to new organisms and when its application is extended to organisms cultivated under new conditions.
Applications of Light-Scattering Spectroscopy
Turbidimetric techniques provide an attractive alternative to microscopy and solute distribution measurements since, in principle at least, they can be applied rapidly and continuously to dilute cell suspensions without perturbing cell structure and physiology. Sophisticated instrumentation may be required to obtain interpretable results, effects of cellular polydispersity may be difficult to assess, and, as a result, long sample acquisition times may compromise the fundamentally noninvasive nature of this technique. The intensity of light scattered by a suspension of cells in a liquid medium depends upon instrumental parameters as well as on the properties of the cells and their suspending medium. In terms of instrumentation, the critical factors are the wavelength of the incident light in the experimental medium, its polarization, and the angle(s) to the incident beam at which scattered light is detected.
When turbidimetric measurements are made with a conventional spectrophotometer, the incident light is unpolarized and usually has a wavelength (in the range 0.4 to 0.7 µm) comparable to cellular dimensions (0.3 to 3.0 µm). The detector captures light transmitted over a wide range of angles from 0° through approximately 20° to the incident beam. The total intensity of all light scattered at wider angles to the incident beam, which is the integral of intensity over those wider angles, is determined as the difference between the intensity of the incident light and that of the transmitted light. When analogous measurements are made with a modern light-scattering spectrometer, on the other hand, the incident light (usually originating from a helium-neon laser and with a wavelength of 632.8 nm) may be polarized. The intensity of the scattered light is measured directly and (either sequentially or simultaneously) at a series of angles to the incident beam (potentially from approximately 5° [forward scatter] through 180° [back scatter]).
The intensity of light scattered by cells in suspension depends on their concentration and the distributions of their sizes, their shapes, and the differences between their refractive indices and the refractive index of their suspending medium. Equations relating the intensity of scattered light to the listed instrument parameters and to particle size, shape, and refractive index are well known for certain particle populations. The applicability of each model depends on the relationship between particle size and the wavelength and polarization of the incident light (128, 282). Monodisperse populations of spheres, cylinders, and ellipses (and combinations of these shapes) have been considered in this way. The derived relationships usually apply specifically to solid particles or to thin-shelled particles, where the shell thickness and the refractive indices of the particle or of the particle shell and the particle lumen are critical. In some cases, scattering by polydisperse particle populations has also been predicted. These derivations and their experimental application to simple particle systems reveal that detailed information about particle size, shape, refractive index, and even polydispersity can be obtained if the incident light is polarized and the scattered-light intensity is measured as a function of scattering angle.
Light-scattering spectroscopy has potential for the study of bacterial cells, but they must be recognized as complex particles with internal structures that may change as a consequence of solvent perturbations. Turbidimetric measurements performed with a conventional spectrophotometer cannot be interpreted, a priori, in terms of any single particle characteristic such as size, shape, or refractive index. In the flow cytometer, light absorption, fluorescence, and/or scattering by individual particles is measured as they pass appropriate detectors in single file (22, 128). The issue of polydispersity is therefore addressed directly through individual examination of large numbers of particles, but other issues outlined above also apply to these measurements. Each of these techniques can be effectively applied to detect rapid cellular changes due to solvent perturbation, but the origins of those changes may be difficult to assign unequivocally. Indeed, in dynamic systems, structural changes may go undetected if simultaneous changes to multiple particle characteristics have opposing effects on light-scattering intensity and/or if only total scattered light intensity is measured.
ACKNOWLEDGMENTS
|
|
|---|
Thanks for assistance, encouragement, patience, comments on drafts of this review, and stimulating discussions are due to members of my laboratory; to Ross Hallett and Bernard Nickel and members of their laboratories (Department of Physics, University of Guelph); to Karlheinz Altendorf, Evert Bakker, and Kerstin Jung and their colleagues at the Universität Osnabrück; and to Kathryn Boys, Laszlo Csonka, Ursula Franklin, Arthur Koch, Reinhard Krämer, Ann Oaks, Jörg Kunte, Peter Rand, Sharon Taylor, and Henry Wiseman.
Research on osmosensing conducted in my laboratory and that of my Guelph collaborators (Ross Hallett and Bernard Nickel) is supported by the Natural Sciences and Engineering Research Council of Canada.
FOOTNOTES
* Mailing address: Department of Microbiology, University of Guelph, Guelph, ON, Canada N1G 2W1. Phone: (519) 824-4120, ext. 3866. Fax: (519) 837-1802. E-mail: jwood{at}uoguelph.ca.
REFERENCES
|
|
|---|
| 1. | Alemohammad, M. M., and C. J. Knowles. 1974. Osmotically induced volume and turbidity changes of Escherichia coli due to salts, sucrose and glycerol, with particular reference to the rapid permeation of glycerol into the cell. J. Gen. Microbiol. 82:125-142[Medline]. |
| 1a. | Alexander, D., A. Lipski, and J. M. Wood. Unpublished data. |
| 2. | Altendorf, K., and W. Epstein. 1993. Kdp-ATPase of Escherichia coli. Cell. Physiol. Biochem. 4:160-168. |
| 3. | Anderson, C. F., and M. T. Record, Jr. 1995. Salt-nucleic acid interactions. Annu. Rev. Phys. Chem. 46:657-700[Medline]. |
| 4. |
Asha, H., and J. Gowrishankar.
1993.
Regulation of kdp operon expression in Escherichia coli: evidence against turgor as signal for transcriptional control.
J. Bacteriol.
175:4528-4537 |
| 5. | Aspedon, A., and E. A. Groisman. 1996. The antibacterial action of protamine: evidence for disruption of cytoplasmic membrane energization in Salmonella typhimurium. Microbiology 142:3389-3397[Abstract]. |
| 6. | Bakker, E. P. 1993. Cell K+ and K+ transport systems in prokaryotes, p. 205-224. In E. P. Bakker (ed.), Alkali cation transport systems in prokaryotes. CRC Press, Inc., Boca Raton, Fla. |
| 7. | Bakker, E. P. 1993. Low-affinity K+ uptake systems, p. 253-275. In E. P. Bakker (ed.), Alkali cation transport systems in prokaryotes. CRC Press, Inc., Boca Raton, Fla. |
| 8. |
Bakker, E. P.,
I. R. Booth,
U. Dinnbier,
W. Epstein, and A. Gajewska.
1987.
Evidence for multiple K+ export systems in Escherichia coli.
J. Bacteriol.
169:3743-3749 |
| 9. |
Baldwin, W. W.,
M. A. Kirkish, and A. L. Koch.
1994.
A change in a single gene of Salmonella typhimurium can dramatically change its buoyant density.
J. Bacteriol.
176:5001-5004 |
| 10. |
Baldwin, W. W., and H. Kubitschek.
1984.
Evidence for osmoregulation of cell growth and buoyant density in Escherichia coli.
J. Bacteriol.
159:393-394 |
| 11. | Baldwin, W. W., R. Myer, N. Powell, E. Anderson, and A. L. Koch. 1995. Buoyant density of Escherichia coli is determined solely by the osmolarity of the culture medium. Arch. Microbiol. 164:155-157[Medline]. |
| 12. |
Baldwin, W. W.,
M. J. T. Sheu,
P. W. Bankston, and C. Woldringh.
1988.
Changes in buoyant density and cell size of Escherichia coli in response to osmotic shocks.
J. Bacteriol.
170:452-455 |
| 13. | Bartucci, R., S. Belsito, and L. Sportelli. 1996. Neutral lipid bilayers interacting with chaotropic ions. Chem. Phys. Lipids 79:171-180. |
| 14. | Berrier, C., M. Besnard, B. Ajouz, A. Coulombe, and A. Ghazi. 1996. Multiple mechanosensitive ion channels from Escherichia coli, activated at different thresholds of applied pressure. J. Membr. Biol. 151:175-187[Medline]. |
| 15. | Berrier, C., A. Coulombe, C. Houssin, and A. Ghazi. 1989. A patch-clamp study of ion channels of inner and outer membranes and of contact zones of E. coli fused into giant liposomes. FEBS Lett. 259:27-32[Medline]. |
| 16. | Berrier, C., A. Coulombe, I. Szabo, M. Zoratti, and A. Ghazi. 1992. Gadolinium ion inhibits loss of metabolites induced by osmotic shock and large stretch-activated channels in bacteria. Eur. J. Biochem. 206:559-565[Abstract]. |
| 17. | Biondi, A. C., M. R. Féliz, and E. A. Disalvo. 1991. Surface changes induced by osmotic stress and its influence on the glycerol permeability in lipid bilayers. Biochim. Biophys. Acta 1069:5-13[Medline]. |
| 18. | Bisson, M. A., and G. O. Kirst. 1995. Osmotic acclimation and turgor pressure regulation in algae. Naturwissenschaften 82:461-471. |
| 19. | Bloom, M., E. Evans, and O. G. Mouritsen. 1991. Physical properties of the fluid lipid-bilayer component of cell membranes: a perspective. Q. Rev. Biophys. 24:293-397[Medline]. |
| 20. |
Blount, P.,
M. J. Schroeder, and C. Kung.
1997.
Mutations in a bacterial mechanosensitive channel change the cellular response to osmotic stress.
J. Biol. Chem.
272:32150-32157 |
| 21. |
Blount, P.,
S. I. Sukharev,
P. Moe, and C. Kung.
1997.
Mechanosensitive channels of E. coli: a genetic and molecular dissection.
Biol. Bull.
192:126-127 |
| 22. | Blum, J. J., and A. E. Balber. 1996. Osmotic and metabolic-induced changes in light scattering of Leishmania donovani as measured by flow cytometry. J. Eukaryot. Microbiol. 43:213-217. |
| 23. |
Bogdanov, M., and W. Dowhan.
1995.
Phosphatidylethanolamine is required for the in vivo function of the membrane-associated lactose permease of Escherichia coli.
J. Biol. Chem.
270:732-739 |
| 24. |
Bogdanov, M.,
J. Sun,
H. R. Kaback, and W. Dowhan.
1996.
A phospholipid acts as a chaperone in assembly of a membrane transport protein.
J. Biol. Chem.
271:11615-11618 |
| 25. | Booth, I. R., and C. F. Higgins. 1990. Enteric bacteria and osmotic stress: intracellular potassium glutamate as a secondary signal of osmotic stress? FEMS Microbiol. Rev. 75:239-246. |
| 26. |
Bossemeyer, D.,
A. Borchard,
D. C. Dosch,
G. L. Helmer,
W. Epstein,
I. R. Booth, and E. P. Bakker.
1989.
K+-transport protein TrkA of Escherichia coli is a peripheral membrane protein that requires other trk gene products for attachment to the cytoplasmic membrane.
J. Biol. Chem.
264:16403-16410 |
| 27. | Boyer, J. S. 1988. Cell enlargement and growth-induced water potentials. Physiol. Plant. 73:311-316. |
| 28. | Burg, M. B. 1992. Molecular basis for accumulation of compatible osmolytes in mammalian cells, p. 33-51. In G. N. Somero, C. B. Osmond, and C. L. Bolis (ed.), Water and life: comparative analysis of water relationships at the organismic, cellular and molecular levels. Springer-Verlag KG, Berlin, Germany. |
| 29. | Burg, M. B. 1996. Coordinate regulation of organic osmolytes in renal cells. Kidney Int. 49:1684-1685[Medline]. |
| 30. |
Buurman, E. T.,
K.-T. Kim, and W. Epstein.
1995.
Genetic evidence for two sequentially occupied K+ binding sites in the Kdp transport ATPase.
J. Biol. Chem.
270:6678-6685 |
| 31. |
Cairney, J.,
I. R. Booth, and C. F. Higgins.
1985.
Salmonella typhimurium proP gene encodes a transport system for the osmoprotectant betaine.
J. Bacteriol.
164:1218-1223 |
| 32. |
Calamita, G.,
W. R. Bishai,
G. M. Preston,
W. B. Guggino, and P. Agre.
1995.
Molecular cloning and characterization of AqpZ, a water channel from Escherichia coli.
J. Biol. Chem.
270:29063-29066 |
| 33. |
Calamita, G.,
B. Kempf,
M. Bonhivers,
W. R. Bishai,
E. Bremer, and P. Agre.
1998.
Regulation of the Escherichia coli water channel gene aqpZ.
Proc. Natl. Acad. Sci. USA
95:3627-3631 |
| 34. | Calamita, G., B. Kempf, K. E. Rudd, M. Bonhivers, S. Kneip, W. R. Bishai, E. Bremer, and P. Agre. 1997. The aquaporin-Z water channel gene of Escherichia coli: structure, organization and phylogeny. Biol. Cell. 89:321-329[Medline]. |
| 35. | Cantor, R. S. 1997. The lateral pressure profile in membranes: a physical mechanism of general anesthesia. Biochemistry 36:2339-2344[Medline]. |
| 36. | Capp, M. W., D. S. Cayley, W. Zhang, H. J. Guttman, S. E. Melcher, R. M. Saecker, C. F. Anderson, and M. T. Record, Jr. 1996. Compensating effects of opposing changes in putrescine (2+) and K+ concentrations on lac repressor-lac operator binding: in vitro thermodynamic analysis and in vivo relevance. J. Mol. Biol. 258:25-36[Medline]. |
| 37. |
Castle, A. M.,
R. M. MacNab, and R. G. Shulman.
1986.
Measurement of intracellular sodium concentration and sodium transport in Escherichia coli by 23Na nuclear magnetic resonance.
J. Biol. Chem.
261:3288-3294 |
| 38. | Cayley, S., B. A. Lewis, H. J. Guttman, and M. T. Record, Jr. 1991. Characterization of the cytoplasm of Escherichia coli K-12 as a function of external osmolarity: implications for protein-DNA interactions in vivo. J. Mol. Biol. 222:281-300[Medline]. |
| 39. |
Cayley, S.,
B. A. Lewis, and M. T. Record, Jr.
1992.
Origins of the osmoprotective properties of betaine and proline in Escherichia coli K-12.
J. Bacteriol.
174:1586-1595 |
| 40. |
Cayley, S.,
M. T. Record, Jr., and B. A. Lewis.
1989.
Accumulation of 3-(N-morpholino)propanesulfonate by osmotically stressed Escherichia coli K-12.
J. Bacteriol.
171:3597-3602 |
| 41. | Collins, K. D., and M. W. Washabaugh. 1985. The Hofmeister effect and the behaviour of water at interfaces. Q. Rev. Biophys. 18:323-422[Medline]. |
| 42. | Cooper, S. 1991. Bacterial growth and division: biochemistry and regulation of prokaryotic and eukaryotic division cycles, p. 247-252. Academic Press, Inc., San Diego, Calif. |
| 43. | Cosgrove, D. 1986. Biophysical control of plant growth. Annu. Rev. Plant Physiol. 37:377-405. |
| 44. | Crowe, J. H., and L. M. Crowe. 1992. Membrane integrity in anhydrobiotic organisms: toward a mechanism for stabilizing dry cells, p. 87-103. In G. N. Somero, C. B. Osmond, and C. L. Bolis (ed.), Water and life: comparative analysis of water relationships at the organismic, cellular and molecular levels. Springer-Verlag KG, Berlin, Germany. |
| 45. |
Csonka, L. N.
1989.
Physiological and genetic responses of bacteria to osmotic stress.
Microbiol. Rev.
53:121-147 |
| 46. | Csonka, L. N., and W. Epstein. 1996. Osmoregulation, p. 1210-1223. In F. C. Neidhardt, R. Curtiss III, J. L. Ingraham, E. C. C. Lin, K. B. Low, B. Magasanik, W. S. Reznikoff, M. Riley, M. Schaechter, and H. E. Umbarger (ed.), Escherichia coli and Salmonella: cellular and molecular biology, 2nd ed. ASM Press, Washington, D.C. |
| 47. | Csonka, L. N., and A. D. Hanson. 1991. Prokaryotic osmoregulation: genetics and physiology. Annu. Rev. Microbiol. 45:569-606[Medline]. |
| 48. | Cui, C., and J. Adler. 1996. Effect of mutation of potassium-efflux system, KefA, on mechanosensitive channels in the cytoplasmic membrane of Escherichia coli. J. Membr. Biol. 150:143-152[Medline]. |
| 49. | Cui, C., D. O. Smith, and J. Adler. 1995. Characterization of mechanosensitive channels in Escherichia coli cytoplasmic membrane by whole-cell patch clamp recording. J. Membr. Biol. 144:31-42[Medline]. |
| 50. | Culham, D. E., B. Lasby, A. G. Marangoni, J. L. Milner, B. A. Steer, R. W. van Nues, and J. M. Wood. 1993. Isolation and sequencing of Escherichia coli gene proP reveals unusual structural features of the osmoregulatory proline/betaine transporter, ProP. J. Mol. Biol. 229:268-276[Medline]. |
| 50a. | Culham, D. E., R. T. Voegele, and J. M. Wood. Unpublished data. |
| 51. |
Dai, J., and M. P. Sheetz.
1995.
Mechanical properties of neuronal growth cone membranes studied by tether formation with laser optical tweezers.
Biophys. J.
68:988-996 |
| 52. | de Gier, J. 1998. Osmotic behaviour and permeability properties of liposomes. Chem. Phys. Lipids 64:187-196. |
| 53. | de la Vega, A., and A. H. Delcour. 1995. Cadaverine induces closing of E. coli porins. EMBO J. 14:6058-6065[Medline]. |
| 54. | Delcour, A. H., J. Adler, C. Kung, and B. Martinac. 1992. Membrane-derived oligosaccharides (MDO's) promote closing of an E. coli porin channel. FEBS Lett. 304:216-220[Medline]. |
| 55. |
Deshnium, P.,
Z. Gombos,
Y. Nishiyama, and N. Murata.
1997.
The action in vivo of glycine betaine in enhancement of tolerance of Synechococcus sp strain PCC 7942 to low temperature.
J. Bacteriol.
179:339-344 |
| 56. | Dinnbier, U., E. Limpinsel, R. Schmid, and E. P. Bakker. 1988. Transient accumulation of potassium glutamate and its replacement by trehalose during adaptation of growing cells of Escherichia coli K-12 to elevated sodium chloride concentrations. Arch. Microbiol. 150:348-357[Medline]. |
| 57. | Dowhan, W. 1997. Molecular basis for membrane phospholipid diversity: why are there so many lipids? Annu. Rev. Biochem. 66:199-232[Medline]. |
| 58. | Doyle, R. J., and R. E. Marquis. 1998. Elastic, flexible peptidoglycan and bacterial cell wall properties. Trends Microbiol. 2:57-60. |
| 59. |
Dunlap, V. J., and L. N. Csonka.
1985.
Osmotic regulation of L-proline transport in Salmonella typhimurium.
J. Bacteriol.
163:296-304 |
| 60. | Epand, R. F., and I. Polozov. 1996. Liposomes and membrane stability, p. 105-111. In Y. Barenholz, and D. D. Lasic (ed.), Handbook of nonmedical applications of liposomes. CRC Press, Inc., Boca Raton, Fla. |
| 61. | Epand, R. M. 1997. Studies of membrane physical properties and their role in biological function. Biochem. Soc. Trans. 25:1073-1079[Medline]. |
| 62. | Epand, R. M., and M. Bryszewska. 1988. Modulation of the bilayer to hexagonal phase transition and solvation of phosphatidylethanolamines in aqueous salt solutions. Biochemistry 27:8776-8779[Medline]. |
| 63. |
Epand, R. M., and R. F. Epand.
1994.
Calorimetric detection of curvature strain in phospholipid bilayers.
Biophys. J.
66:1450-1456 |
| 64. | Ermakov, Y. A., A. Z. Averbakh, V. I. Lobyshev, and S. I. Sukharev. 1996. Effects of gadolinium on electrostatic and thermodynamic properties of lipid membranes. Biophys. J. 87:7574-7578. |
| 65. | Ermakov, Y. A., A. Z. Averbakh, and S. I. Sukharev. 1997. Lipid and cell membranes in the presence of gadolinium and other ions with high affinity to lipids. I. Dipole and diffuse components of the boundary potential. Membr. Cell Biol. 11:539-554[Medline]. |
| 66. |
Ertel, A.,
A. G. Marangoni,
J. Marsh,
F. R. Hallett, and J. M. Wood.
1993.
Mechanical properties of vesicles. I. Coordinated analysis of swelling and lysis.
Biophys. J.
64:426-434 |
| 67. | Evans, E. A., and R. Skalak. 1980. Mechanics and thermodynamics of biomembranes. CRC Press, Inc., Boca Raton, Fla. |
| 68. | Faatz, E., A. Middendorf, and E. Bremer. 1988. Cloned structural genes for the osmotically regulated binding-protein-dependent glycine betaine transport system (ProU) of Escherichia coli K-12. Mol. Microbiol. 2:265-279[Medline]. |
| 69. |
Farwick, M.,
R. M. Siewe, and R. Krämer.
1995.
Glycine betaine uptake after hyperosmotic shift in Corynebacterium glutamicum.
J. Bacteriol.
177:4690-4695 |
| 70. | Fendler, K., S. Drose, K. Altendorf, and E. Bamberg. 1996. Electrogenic K+ transport by the Kdp-ATPase of Escherichia coli. Biochemistry 35:8009-8017[Medline]. |
| 71. | Finkelstein, A. 1987. Water movement through lipid bilayers, pores and plasma membranes: theory and reality. John Wiley & Sons, Inc., New York, N.Y. |
| 72. | Foley, M., J. M. Brass, J. Birmingham, W. R. Cook, P. B. Garland, C. F. Higgins, and L. I. Rothfield. 1989. Compartmentalization of the periplasm at cell division sites in Escherichia coli as shown by fluorescence photobleaching experiments. Mol. Microbiol. 3:1329-1336[Medline]. |
| 73. |
Free, A., and C. J. Dorman.
1997.
The Escherichia coli stpA gene is transiently expressed during growth in rich medium and is induced in minimal medium and by stress conditions.
J. Bacteriol.
179:909-918 |
| 74. | Galinski, E. A. 1995. Osmoadaptation in bacteria. Adv. Microb. Physiol. 37:273-328. |
| 75. | García-Añoveros, J., and D. P. Corey. 1997. The molecules of mechanosensation. Annu. Rev. Neurosci. 20:567-594[Medline]. |
| 76. | Garcia-Romeu, F., F. Borgese, H. Guizouarn, B. Fievet, and R. Motais. 1996. A role for the anion exchanger AE1 (band 3 protein) in cell volume regulation. Cell Mol. Biol. 42:985-994[Medline]. |
| 77. |
Garner, M. M., and M. B. Burg.
1994.
Macromolecular crowding and confinement in cells exposed to hypertonicity.
Am. J. Physiol.
266:C877-C892 |
| 78. | Gennis, R. B. 1989. Biomembranes: molecular structure and function. Springer-Verlag, New York, N.Y. |
| 79. |
Gerhardt, P. N. M.,
L. T. Smith, and G. M. Smith.
1996.
Sodium-driven, osmotically activated glycine betaine transport in Listeria monocytogenes membrane vesicles.
J. Bacteriol.
178:6105-6109 |
| 80. |
Glaasker, E.,
W. N. Konings, and B. Poolman.
1996.
Glycine betaine fluxes in Lactobacillus plantarum during osmostasis and hyper- and hypo-osmotic shock.
J. Biol. Chem.
271:10060-10065 |
| 81. |
Glaasker, E.,
W. N. Konings, and B. Poolman.
1996.
Osmotic regulation of intracellular solute pools in Lactobacillus plantarum.
J. Bacteriol.
178:575-582 |
| 82. |
Gouesbet, G.,
A. Trautwetter,
S. Bonnassie,
L. F. Wu, and C. Blanco.
1996.
Characterization of the Erwinia chrysanthemi osmoprotectant transporter gene ousA.
J. Bacteriol.
178:447-455 |
| 83. |
Gowrishankar, J.
1985.
Identification of osmoresponsive genes in Escherichia coli: evidence for participation of potassium and proline transport systems in osmoregulation.
J. Bacteriol.
164:434-445 |
| 84. |
Grothe, S.,
R. L. Krogsrud,
D. J. McClellan,
J. L. Milner, and J. M. Wood.
1986.
Proline transport and osmotic stress response in Escherichia coli K-12.
J. Bacteriol.
166:253-259 |
| 85. | Gruner, S. M. 1994. Coupling between bilayer curvature elasticity and membrane protein activity, p. 129-149. In M. Blank, and I. Vodyanoy (ed.), Biomembrane electrochemistry. American Chemical Society, Washington, D.C. |
| 86. |
Gustin, M. C.,
X.-L. Zhou,
B. Martinac, and C. Kung.
1988.
A mechanosensitive channel in the yeast plasma membrane.
Science
242:762-765 |
| 87. | Gutierrez, C., T. Abee, and I. R. Booth. 1995. Physiology of the osmotic stress response in microorganisms. Int. J. Food Microbiol. 28:233-244[Medline]. |
| 88. | Gutierrez, C., S. Gordia, and S. Bonnassie. 1995. Characterization of the osmotically inducible gene osmE of Escherichia coli. Mol. Microbiol. 16:553-563[Medline]. |
| 89. | Gutknecht, J., D. F. Hastings, and M. A. Bisson. 1978. Ion transport and turgor pressure regulation in giant algal cells, p. 125-174. In G. Giebisch (ed.), Transport across multi-membrane systems. Springer-Verlag KG, Berlin, Germany. |
| 90. | Guttman, H. J., S. Cayley, M. Li, C. F. Anderson, and M. T. Record, Jr. 1995. K+-ribosome interactions determine the large enhancements of 39K NMR transverse relaxation rates in the cytoplasm of Escherichia coli K-12. Biochemistry 34:1393-1404[Medline]. |
| 91. | Ha, J.-H., M. W. Capp, M. D. Hohenwalter, M. Baskerville, and M. T. Record, Jr. 1992. Thermodynamic stoichiometries of participation of water, cations and anions in specific and non-specific binding of lac repressor to DNA: possible origins of the "glutamate effect" on protein-DNA interactions. J. Mol. Biol. 228:252-264[Medline]. |
| 92. | Haardt, M., B. Kempf, E. Faatz, and E. Bremer. 1995. The osmoprotectant proline betaine is a major substrate for the binding-protein-dependent transport system ProU of Escherichia coli K-12. Mol. Gen. Genet. 246:783-786[Medline]. |
| 93. | Hallett, F. R. 1996. Size distributions from static light scattering, p. 477-493. In W. Brown (ed.), Light scattering: principles and development. Clarendon Press, Oxford, United Kingdom. |
| 94. |
Hallett, F. R.,
J. Marsh,
B. G. Nickel, and J. M. Wood.
1993.
Mechanical properties of vesicles. II. A model for osmotic swelling and lysis.
Biophys. J.
64:435-442 |
| 95. | Harold, F. M., and N. P. Money. 1995. What forces drive cell wall expansion? Can. J. Bot. 73(Suppl. 1):S379-S383. |
| 96. | Harold, R. L., F. M. Harold, and N. P. Money. 1996. Growth and morphogenesis in Saprolegnia ferax: is turgor required? Protoplasma 191:105-114. |
| 97. | Hatanaka, Y., K. Kinoshita, and M. Yamazaki. 1997. Osmotic stress induces a phase transition from interdigitated gel phase to bilayer gel phase in multilamellar vesicles of dihexadecylphosphatidylcholine. Biophys. Chem. 65:229-233[Medline]. |
| 98. | Hazel, J. R., and E. E. Williams. 1990. The role of alterations in membrane lipid composition in enabling physiological adaptation of organisms to their physical environment. Prog. Lipid Res. 29:167-227[Medline]. |
| 99. | Hildebrandt, E. R., and N. R. Cozzarelli. 1995. Comparison of recombination in vitro and in E. coli cells: measure of the effective concentration of DNA in vivo. Cell 81:331-340[Medline]. |
| 100. |
Horlacher, R., and W. Boos.
1997.
Characterization of TreR, the major regulator of the Escherichia coli trehalose system.
J. Biol. Chem.
272:13026-13032 |
| 101. | Houssin, C., N. Eynard, E. Shechter, and A. Ghazi. 1991. Effect of osmotic pressure on membrane energy-linked functions in Escherichia coli. Biochim. Biophys. Acta 1056:76-84[Medline]. |
| 102. |
Hüsken, D.,
E. Steudle, and U. Zimmerman.
1978.
Pressure probe technique for measuring water relations of cells in higher plants.
Plant Physiol.
61:158-163 |
| 103. |
Inoue, K.,
H. Matsuzaki,
K. Matsumoto, and I. Shibuya.
1997.
Unbalanced membrane phospholipid compositions affect transcriptional expression of certain regulatory genes in Escherichia coli.
J. Bacteriol.
179:2872-2878 |
| 104. | In't Veld, G., A. J. M. Driessen, and W. N. Konings. 1991. Bacterial solute transport proteins in their lipid environment. FEMS Microbiol. Rev. 12:293-314. |
| 105. | In't Veld, G., A. J. M. Driessen, J. A. F. Op den Kamp, and W. N. Konings. 1991. Hydrophobic membrane thickness and lipid-protein interactions of the leucine transport system of Lactococcus lactis. Biochim. Biophys. Acta 1065:203-212[Medline]. |
| 106. | Israelachvili, J., and H. Wennerstroem. 1996. Role of hydration and water structure in biological and colloidal interactions. Nature 379:219-225[Medline]. |
| 107. |
Iyer, R., and A. H. Delcour.
1997.
Complex inhibition of OmpF and OmpC bacterial porins by polyamines.
J. Biol. Chem.
272:18595-18601 |
| 108. |
Jovanovich, S. B.,
M. Martinell,
M. T. Record, Jr., and R. B. Burgess.
1988.
Rapid response to osmotic upshift by osmoregulated genes in Escherichia coli and Salmonella typhimurium.
J. Bacteriol.
170:534-539 |
| 109. |
Jung, J. U.,
C. Gutierrez,
F. Martin,
M. Ardourel, and M. Villarejo.
1990.
Transcription of osmB, a gene encoding an Escherichia coli lipoprotein, is regulated by dual signals.
J. Biol. Chem.
265:10574-10581 |
| 110. |
Jung, K., and K. Altendorf.
1998.
Truncation of amino acids 12-128 causes deregulation of the phosphatase activity of the sensor kinase KdpD of Escherichia coli.
J. Biol. Chem.
273:17406-17410 |
| 111. | Jung, K., R. Heermann, M. Meyer, and K. Altendorf. 1998. Effects of cysteine replacements on the properties of the turgor sensor KdpD of Escherichia coli. Biochim. Biophys. Acta 1372:311-322[Medline]. |
| 112. |
Jung, K.,
B. Tjaden, and K. Altendorf.
1997.
Purification, reconstitution, and characterization of KdpD, the turgor sensor of Escherichia coli.
J. Biol. Chem.
272:10847-10852 |
| 113. |
Kappes, R. M.,
B. Kempf, and E. Bremer.
1996.
Three transport systems for the osmoprotectant glycine betaine operate in Bacillus subtilis: characterization of OpuD.
J. Bacteriol.
178:5071-5079 |
| 114. |
Kashiwagi, K.,
S. Miyamoto,
F. Suzuki,
H. Kobayashi, and K. Igarashi.
1992.
Excretion of putrescine by the putrescine-ornithine antiporter encoded by the potE gene of Escherichia coli.
Proc. Natl. Acad. Sci. USA
89:4529-4533 |
| 115. |
Kashiwagi, K.,
S. Shibuya,
H. Tomitori,
A. Kuraishi, and K. Igarishi.
1997.
Excretion and uptake of putrescine by the PotE protein in Escherichia coli.
J. Biol. Chem.
272:6318-6323 |
| 116. |
Kashiwagi, K.,
T. Suzuki,
F. Suzuki,
T. Furuchi,
H. Kobayashi, and K. Igarashi.
1991.
Coexistence of the genes for putrescine transport protein and ornithine decarboxylase at 16 min on the Escherichia coli chromosome.
J. Biol. Chem.
266:20922-20927 |
| 117. | Kashket, E. R. 1985. The proton motive force in bacteria: a critical assessment of methods. Annu. Rev. Microbiol. 39:219-242[Medline]. |
| 118. | Kellenberger, E. 1990. The `Bayer bridges' confronted with results from improved electron microscopy methods. Mol. Microbiol. 4:697-705[Medline]. |
| 119. | Kempf, B., and E. Bremer. 1998. Uptake and synthesis of compatible solutes as microbial stress responses to high osmolality environments. Arch. Microbiol. 170:319-330[Medline]. |
| 120. | Ken-Dror, S., R. Preger, and Y. Avi-Dor. 1986. Role of betaine in the control of respiration and osmoregulation of a halotolerant bacterium. FEMS Microbiol. Rev. 39:115-120. |
| 121. | Kennedy, E. P. 1996. Membrane-derived oligosaccharides (periplasmic beta-D-glucans) of Escherichia coli, p. 1064-1072. In F. C. Neidhardt, R. Curtiss III, J. L. Ingraham, E. C. C. Lin, K. B. Low, B. Magasanik, W. S. Reznikoff, M. Riley, M. Schaechter, and H. E. Umbarger (ed.), Escherichia coli and Salmonella: cellular and molecular biology, 2nd ed. ASM Press, Washington, D.C. |
| 122. | Kinnunen, P. K. J., J. Y. A. Lehtonen, M. Rytömaa, and P. Mustonen. 1994. Lipid dynamics and peripheral interactions of proteins with membrane surfaces. Chem. Phys. Lipids 73:181-207[Medline]. |
| 123. | Kinoshita, K., and M. Yamazaki. 1997. Phase transition between hexagonal II (HII) and liquid-crystalline phase induced by interaction between solvents and segments of the membrane surface of dioleoylphosphatidylethanolamine. Biochim. Biophys. Acta 1330:199-206[Medline]. |
| 124. |
Ko, R.,
L. T. Smith, and G. M. Smith.
1994.
Glycine betaine confers enhanced osmotolerance and cryotolerance on Listeria monocytogenes.
J. Bacteriol.
176:426-431 |
| 124a. | Ko, R., and L. T. Smith. Personal communication. |
| 125. |
Koch, A. L.
1984.
Shrinkage of growing Escherichia coli cells by osmotic challenge.
J. Bacteriol.
159:919-924 |
| 126. | Koch, A. L. 1995. The geometry and osmotic relations of plasmolysis spaces in bacteria and the role of endocytosis, tubular structures and Scheie structures in their formation. J. Theor. Biol. 176:471-492. |
| 127. |
Koch, A. L.,
S. L. Lane,
J. A. Miller, and D. G. Nickens.
1987.
Contraction of filaments of Escherichia coli after disruption of cell membrane by detergent.
J. Bacteriol.
169:1979-1984 |
| 128. | Koch, A. L., B. R. Robertson, and D. K. Button. 1996. Deduction of the cell volume and mass from forward scatter intensity of bacteria analyzed by flow cytometry. J. Microbiol. Methods 27:49-61. |
| 129. |
Koch, A. L., and S. Woeste.
1992.
Elasticity of the sacculus of Escherichia coli.
J. Bacteriol.
174:4811-4819 |
| 130. | Kollman, R., and K. Altendorf. 1993. ATP-driven potassium transport in right-side-out membrane vesicles via the Kdp system of Escherichia coli. Biochim. Biophys. Acta 1143:62-66[Medline]. |
| 131. | Koo, S.-P., C. F. Higgins, and I. R. Booth. 1991. Regulation of compatible solute accumulation in Salmonella typhimurium: evidence for a glycine betaine efflux system. J. Gen. Microbiol. 137:2617-2625[Medline]. |
| 132. | Kraayenhof, R., G. J. Sterk, H. W. Wong Fong Sang, K. Krab, and R. M. Epand. 1996. Monovalent cations differentially affect membrane surface properties and membrane curvature, as revealed by fluorescent probes and dynamic light scattering. Biochim. Biophys. Acta 1282:293-302[Medline]. |
| 133. | Krämer, R. 1994. Secretion of amino acids by bacteria: physiology and mechanism. FEMS Microbiol. Rev. 13:75-94. |
| 134. | Kubitschek, H. E. 1969. Counting and sizing micro-organisms with the Coulter counter. Meth. Microbiol. 1:593-610. |
| 135. | Kubitschek, H. E. 1987. Buoyant density variation during the cell cycle in microorganisms. Crit. Rev. Microbiol. 14:7397. |
| 136. |
Kubitschek, H. E.,
W. W. Baldwin,
S. J. Schroeter, and R. Graetzer.
1984.
Independence of buoyant cell density and growth rate in Escherichia coli.
J. Bacteriol.
158:296-299 |
| 137. |
Kubitschek, H. E., and J. A. Friske.
1986.
Determination of bacterial cell volume with the Coulter counter.
J. Bacteriol.
168:1466-1467 |
| 138. | Kuchta, T., and N. J. Russell. 1994. Glycine betaine stimulates, but NaCl inhibits, fatty acid biosynthesis in the moderately halophilic eubacterium HX. Arch. Microbiol. 161:234-238. |
| 139. | Kunte, H. J., R. A. Crane, D. E. Culham, D. Richmond, and J. M. Wood. Protein ProQ influences osmotic activation of compatible solute transporter ProP in Escherichia coli K-12. J. Bacteriol., in press. |
| 140. | Lacroix, J.-M., I. Loubens, M. Tempête, B. Menichi, and J.-P. Bohin. 1991. The mdoA locus of Escherichia coli consists of an operon under osmotic control. Mol. Microbiol. 5:1745-1753[Medline]. |
| 141. |
Laimins, L. A.,
D. B. Rhoads, and W. Epstein.
1981.
Osmotic control of kdp operon expression in Escherichia coli.
Proc. Natl. Acad. Sci. USA
78:464-468 |
| 142. |
Lamark, T.,
T. P. Rokenes,
J. McDougall, and A. R. Strom.
1996.
The complex bet promoters of Escherichia coli: regulation by oxygen (ArcA), choline (BetI), and osmotic stress.
J. Bacteriol.
178:1655-1662 |
| 143. | Lamark, T., O. B. Styrvold, and A. R. Strom. 1992. Efflux of choline and glycine betaine from osmoregulating cells of Escherichia coli. FEMS Microbiol. Lett. 96:149-154. |
| 144. | Lambert, C., A. Erdmann, M. Eikmanns, and R. Krämer. 1995. Triggering glutamate excretion in Corynebacterium glutamicum by modulating the membrane state with local anesthetics and osmotic gradients. Appl. Environ. Microbiol. 61:4334-4342[Abstract]. |
| 145. |
Lange, R.,
M. Barth, and R. Hengge-Aronis.
1993.
Complex transcriptional control of the S-dependent stationary-phase-induced and osmotically regulated osmY (csi-5) gene suggests novel roles for Lrp, cyclic AMP (cAMP) receptor protein-cAMP complex, and integration host factor in the stationary phase response of Escherichia coli.
J. Bacteriol.
175:7910-7917 |
| 146. | Larsen, P. I., L. K. Syndes, B. Landfald, and A. R. Strom. 1987. Osmoregulation in Escherichia coli by accumulation of organic osmolytes: betaines, glutamic acid and trehalose. Arch. Microbiol. 147:1-7[Medline]. |
| 147. |
Leduc, M.,
K. Ishidate,
N. Shakibai, and L. I. Rothfield.
1992.
Interactions of Escherichia coli membrane lipoproteins with the murein sacculus.
J. Bacteriol.
174:7982-7988 |
| 148. |
Lehtonen, J. Y. A., and P. K. J. Kinnunen.
1994.
Changes in the lipid dynamics of liposomal membranes induced by poly(ethylene glycol): free volume alterations revealed by inter- and intramolecular excimer-forming phospholipid analogues.
Biophys. J.
66:1981-1990 |
| 149. |
Lehtonen, J. Y. A., and P. K. J. Kinnunen.
1995.
Poly(ethylene glycol)-induced and temperature-dependent phase separation in fluid binary phospholipid membranes.
Biophys. J.
68:525-535 |
| 150. |
Lehtonen, J. Y. A., and P. K. J. Kinnunen.
1997.
Evidence for phospholipid microdomain formation in liquid crystalline liposomes reconstituted with Escherichia coli lactose permease.
Biophys. J.
72:1247-1257 |
| 151. | Leirmo, S., C. Harrison, D. S. Cayley, R. R. Burgess, and M. T. Record, Jr. 1987. Replacement of potassium chloride by potassium glutamate dramatically enhances protein-DNA interactions in vitro. Biochemistry 26:2095-2101[Medline]. |
| 152. | Lemieux, R. U. 1996. How water provides the impetus for molecular recognition in aqueous solution. Acc. Chem. Res. 29:373-380. |
| 153. | Lewis, R. N. A. H., D. A. Mannock, and R. N. McElhaney. 1997. Membrane lipid molecular structure and polymorphism, p. 25-102. In R. Epand (ed.), Lipid polymorphism and membrane properties. Academic Press, Inc., San Diego, Calif. |
| 154. |
Li, N., and M. C. Cannon.
1998.
Gas vesicle genes identified in Bacillus megaterium and functional expression in Escherichia coli.
J. Bacteriol.
180:2450-2458 |
| 155. | Lindblom, G., and L. Rilfors. 1992. Nonlamellar phases formed by membrane lipids. Adv. Colloid Interface Sci. 41:101-125[Medline]. |
| 156. | Lippert, K., and E. A. Galinski. 1992. Enzyme stabilization by ectoine-type compatible solutes: protection against heating, freezing and drying. Appl. Microbiol. Biotechnol. 37:61-65. |
| 157. | Lockhart, J. A. 1965. An analysis of irreversible plant cell elongation. J. Theor. Biol. 8:264-275[Medline]. |
| 158. | Lockhart, J. A. 1965. Cell extension, p. 826-849. In J. Bonner, and J. E. Varner (ed.), Plant biochemistry. Academic Press, Inc., New York, N.Y. |
| 159. | Lucht, J. M., and E. Bremer. 1994. Adaptation of Escherichia coli to high osmolarity environments: osmoregulation of the high-affinity glycine betaine transport system ProU. FEMS Microbiol. Rev. 14:3-20[Medline]. |
| 160. | MacMillan, S. V. 1998. The substrate and inhibitor specificity of the osmoregulatory transporter ProP. M.Sc. thesis. University of Guelph, Guelph, Canada. |
| 161. | Marsh, D. 1996. Lateral pressure in membranes. Biochim. Biophys. Acta 1286:183-223[Medline]. |
| 162. | Marshall, E. V. 1996. Osmoregulation of ProP: elucidating the roles of the ion coupling. Ph.D. thesis. University of Guelph, Guelph, Canada. |
| 163. | Martinac, B., J. Adler, and C. Kung. 1990. Mechanosensitive ion channels of E. coli activated by amphipaths. Nature 348:261-263[Medline]. |
| 164. |
Maurel, C.,
J. Reizer,
J. I. Schroeder,
M. J. Chrispeels, and M. H. Saier, Jr.
1994.
Functional characterization of the Escherichia coli glycerol facilitator, GlpF, in Xenopus oocytes.
J. Biol. Chem.
269:11869-11872 |
| 165. | McElhaney, R. N. 1984. The structure and function of the Acholeplasma laidlawii plasma membrane. Biochim. Biophys. Acta 779:1-42[Medline]. |
| 166. | McIntosh, T. J. 1996. Hydration properties of lamellar and non-lamellar phases of phosphatidylcholine and phosphatidylethanolamine. Chem. Phys. Lipids 81:117-131[Medline]. |
| 167. | McLaggan, D., and W. Epstein. 1991. Escherichia coli accumulates the eukaryotic osmolyte taurine at high osmolarity. FEMS Microbiol. Lett. 81:209-214. |
| 168. |
McLaggan, D.,
J. Naprstek,
E. T. Buurman, and W. Epstein.
1994.
Interdependence of K+ and glutamate accumulation during osmotic adaptation of Escherichia coli.
J. Biol. Chem.
269:1911-1917 |
| 169. |
Mellies, J.,
R. Brems, and M. Villarejo.
1994.
The Escherichia coli proU promoter element and its contribution to osmotically signaled transcription activation.
J. Bacteriol.
176:3638-3645 |
| 170. |
Mellies, J.,
A. Wise, and M. Villarejo.
1995.
Two different Escherichia coli proP promoters respond to osmotic and growth phase signals.
J. Bacteriol.
177:144-151 |
| 171. | Meury, J. 1988. Glycine betaine reverses the effects of osmotic stress on DNA replication and cellular division in Escherichia coli. Arch. Microbiol. 149:232-239[Medline]. |
| 172. | Meury, J. 1994. Immediate and transient inhibition of the respiration of Escherichia coli under hyperosmotic shock. FEMS Microbiol. Lett. 121:281-286[Medline]. |
| 173. | Meury, J., A. Bahloul, and M. Kohiyama. 1993. Impairment of nucleoid segregation and cell division at high osmolarity in a strain of Escherichia coli overproducing the chaperone DnaK. FEMS Microbiol. Lett. 113:93-100[Medline]. |
| 174. | Meury, J., A. Bahloul, and M. Kohiyama. 1995. Importance of the replication origin sequestration in cell division of Escherichia coli. Biochimie 77:875-879[Medline]. |
| 175. | Meury, J., and M. Kohiyama. 1992. Potassium ions and changes in bacterial DNA supercoiling under osmotic stress. FEMS Microbiol. Lett. 99:159-164. |
| 176. | Meury, J., A. Robin, and P. Monnier-Champeix. 1985. Turgor-controlled K+ fluxes and their pathways in Escherichia coli. Eur. J. Biochem. 151:613-619[Abstract]. |
| 177. |
Mileykovskaya, E., and W. Dowhan.
1997.
The Cpx two-component signal transduction pathway is activated in Escherichia coli mutant strains lacking phosphatidylethanolamine.
J. Bacteriol.
179:1029-1034 |
| 178. | Miller, K. J., and J. M. Wood. 1996. Osmoadaptation by rhizosphere bacteria. Annu. Rev. Microbiol. 50:101-136[Medline]. |
| 179. |
Milner, J. L.,
S. Grothe, and J. M. Wood.
1988.
Proline porter II is activated by a hyperosmotic shift in both whole cells and membrane vesicles of Escherichia coli K12.
J. Biol. Chem.
263:14900-14905 |
| 180. | Milner, J. L., D. J. McClellan, and J. M. Wood. 1987. Factors reducing and promoting the effectiveness of proline as an osmoprotectant in Escherichia coli K12. J. Gen. Microbiol. 133:1851-1860[Medline]. |
| 181. |
Milner, J. L., and J. M. Wood.
1989.
Insertion proQ220::Tn5 alters regulation of proline porter II, a transporter of proline and glycine betaine in Escherichia coli.
J. Bacteriol.
171:947-951 |
| 182. | Minton, A. P. 1997. Influence of excluded volume upon macromolecular structure and associations in `crowded' media. Curr. Opin. Biotechnol. 8:65-69[Medline]. |
| 183. |
Minton, A. P.,
G. G. Coclasure, and J. C. Parker.
1992.
Model for the role of macromolecular crowding in regulation of cellular volume.
Proc. Natl. Acad. Sci. USA
89:10504-10506 |
| 184. |
Mizuno, T.
1998.
His-Asp phosphotransfer signal transduction.
J. Biochem.
123:555-563 |
| 185. | Mohandas, N., and E. Evans. 1994. Mechanical properties of the red cell membrane in relation to molecular structure and genetic defects. Annu. Rev. Biophys. Biomol. Struct. 23:787-818[Medline]. |
| 186. | Money, N. P., and F. M. Harold. 1993. Two water molds can grow without measurable turgor pressure. Planta 190:426-430. |
| 187. | Money, N. P., and R. J. Howard. 1996. Confirmation of a link between fungal pigmentation, turgor pressure, and pathogenicity using a new method of turgor measurement. Fungal Genet. Biol. 20:217-227. |
| 188. | Mouritsen, O. G., and M. Bloom. 1993. Models of lipid-protein interactions in membranes. Annu. Rev. Biophys. Biomol. Struct. 22:145-171[Medline]. |
| 189. | Mouritsen, O. G., and K. Jorgensen. 1992. Dynamic lipid-bilayer heterogeneity: a mesoscopic vehicle for membrane function? Bioessays 14:129-136[Medline]. |
| 190. |
Mui, B. L. S.,
P. R. Cullis,
E. A. Evans, and T. D. Madden.
1993.
Osmotic properties of large unilamellar vesicles prepared by extrusion.
Biophys. J.
64:443-453 |
| 191. | Munns, R. 1993. Physiological processes limiting plant growth in saline soils: some dogmas and hypotheses. Plant Cell Environ. 16:15-24. |
| 192. |
Munro, G. F.,
K. Hercules,
J. Morgan, and W. Sauerbier.
1972.
Dependence of the putrescine content of Escherichia coli on the osmotic strength of the medium.
J. Biol. Chem.
247:1272-1280 |
| 193. | Murphy, L. D., and S. B. Zimmerman. 1997. Isolation and characterization of spermidine nucleoids from Escherichia coli. J. Struct. Biol. 119:321-335[Medline]. |
| 194. | Murphy, L. D., and S. B. Zimmerman. 1997. Stabilization of compact spermidine nucleoids from Escherichia coli under crowded conditions: implications for in vivo nucleoid structure. J. Struct. Biol. 119:346. |
| 195. | Nakashima, K., A. Sugiura, K. Kanamaru, and T. Mizuno. 1993. Signal transduction between the two regulatory components involved in the regulation of the kdpABC operon in Escherichia coli: phosphorylation-dependent functioning of the positive regulator, KdpE. Mol. Microbiol. 7:109-116[Medline]. |
| 196. |
Nakashima, K.,
A. Sugiura, and T. Mizuno.
1993.
Functional reconstitution of the putative Escherichia coli osmosensor, KdpD, in liposomes.
J. Biochem.
114:615-621 |
| 197. | Nakashima, K., H. Sugiura, H. Momoi, and T. Mizuno. 1992. Phosphotransfer signal transduction between two regulatory factors involved in the osmoregulated kdp operon in Escherichia coli. Mol. Microbiol. 6:1777-1784[Medline]. |
| 198. |
Nanninga, N.
1998.
Morphogenesis of Escherichia coli.
Microbiol. Mol. Biol. Rev.
62:110-129 |
| 199. | Nebel, S., P. Ganz, and J. Seelig. 1997. Heat changes in lipid membranes under sudden osmotic stress. Biochemistry 36:2853-2859[Medline]. |
| 200. | Nobel, P. S. 1991. Physicochemical and environmental plant physiology, p. 47-189. Academic Press, Inc., San Diego, Calif. |
| 201. | Ohwada, T., and S. Sagisaka. 1987. An immediate and steep increase in ATP concentration in response to reduced turgor pressure in Escherichia coli B. Arch. Biochem. Biophys. 259:157-163[Medline]. |
| 202. |
Ohyama, T.,
K. Igarashi, and H. Kobayashi.
1994.
Physiological role of the chaA gene in sodium and calcium circulations at a high pH in Escherichia coli.
J. Bacteriol.
176:4311-4315 |
| 203. | Oparka, K. J. 1994. Plasmolysis: new insights into an old process. New Phytol. 126:571-591. |
| 204. |
Padan, E.,
N. Maisler,
D. Taglicht,
R. Karpel, and S. Schuldiner.
1989.
Deletion of ant in Escherichia coli reveals its function in adaptation to high salinity and an alternative Na+/H+ antiporter system.
J. Biol. Chem.
264:20297-20302 |
| 205. | Padan, E., and S. Schuldiner. 1994. Molecular physiology of the Na+/H+ antiporter in Escherichia coli. J. Exp. Biol. 196:443-456[Abstract]. |
| 206. | Padan, E., D. Zilberstein, and H. Rottenberg. 1976. The proton electrochemical gradient in Escherichia coli cells. Eur. J. Biochem. 63:533-541[Abstract]. |
| 207. |
Parker, J. C.
1993.
In defense of cell volume?
Am. J. Physiol.
265:C1191-C1200 |
| 208. | Parra-Lopez, C., R. Lin, A. Aspedon, and E. A. Groisman. 1994. A Salmonella protein that is required for resistance to antimicrobial peptides and transport of potassium. EMBO J. 13:3964-3972[Medline]. |
| 209. | Parsegian, V. A., R. P. Rand, and D. C. Rau. 1995. Macromolecules and water: probing with osmotic stress. Methods Enzymol. 259:43-95[Medline]. |
| 210. | Passioura, J. B., and S. C. Fry. 1992. Turgor and cell expansion. Aust. J. Plant Physiol. 19:565-576. |
| 211. |
Patchett, R. A.,
A. F. Kelly, and R. G. Kroll.
1992.
Effect of sodium chloride on the intracellular solute pools of Listeria monocytogenes.
Appl. Environ. Microbiol.
58:3959-3963 |
| 212. | Peddie, B. A., M. Lever, C. M. Hayman, K. Randall, and S. T. Chambers. 1994. Relationship between osmoprotection and the structure and intracellular accumulation of betaines by Escherichia coli. FEMS Microbiol. Lett. 120:125-132[Medline]. |
| 213. |
Peter, H.,
A. Burkovski, and R. Kramer.
1996.
Isolation, characterization, and expression of the Corynebacterium glutamicum betP gene, encoding the transport system for the compatible solute glycine betaine.
J. Bacteriol.
178:5229-5234 |
| 214. |
Peter, H.,
A. Burkovski, and R. Kramer.
1998.
Osmo-sensing by N- and C-terminal extensions of the glycine betaine uptake system BetP of Corynebacterium glutamicum.
J. Biol. Chem.
273:2567-2574 |
| 215. |
Pinette, M. F. S., and A. L. Koch.
1987.
Variability of the turgor pressure of individual cells of the gram-negative heterotroph Ancylobacter aquaticus.
J. Bacteriol.
169:4737-4742 |
| 216. |
Pinette, M. F. S., and A. L. Koch.
1988.
Turgor pressure responses of a gram-negative bacterium to antibiotic treatment, measured by collapse of gas vesicles.
J. Bacteriol.
170:1129-1136 |
| 217. |
Pinner, E.,
Y. Kotler,
E. Padan, and S. Schuldiner.
1993.
Physiological role of NhaB, a specific Na+/H+ antiporter in Escherichia coli.
J. Biol. Chem.
268:1729-1734 |
| 218. |
Polarek, J. W.,
G. Williams, and W. Epstein.
1992.
The products of the kdpDE operon are required for expression of the Kdp ATPase of Escherichia coli.
J. Bacteriol.
174:2145-2151 |
| 219. | Pont-Lezica, R. F., J. G. McNally, and B. G. Pickard. 1993. Wall-to-membrane linkers in onion epidermis: some hypotheses. Plant Cell Environ. 16:111-123. |
| 220. | Poolman, B., and E. Glaasker. 1998. Regulation of compatible solute accumulation in bacteria. Mol. Microbiol. 29:397-407[Medline]. |
| 221. |
Potts, M.
1994.
Desiccation tolerance of prokaryotes.
Microbiol. Rev.
58:755-805 |
| 222. | Pourkomailian, B., and I. R. Booth. 1992. Glycine betaine transport by Staphylococcus aureus: evidence for two transport systems and for their possible roles in osmoregulation. J. Gen. Microbiol. 138:2515-2518[Medline]. |
| 223. | Pourkomailian, B., and I. R. Booth. 1994. Glycine betaine transport by Staphylococcus aureus: evidence for feedback regulation of the activity of the two transport systems. Microbiology 140:3131-3138[Abstract]. |
| 224. | Puppe, W., A. Siebers, and K. Altendorf. 1992. The phosphorylation site of the Kdp-ATPase of Escherichia coli: site directed mutagenesis of the aspartic acid residues 300 and 307 of the KdpB subunit. Mol. Microbiol. 6:3511-3520[Medline]. |
| 225. |
Puppe, W.,
P. Zimmann,
K. Jung,
M. Lucassen, and K. Altendorf.
1996.
Characterization of truncated forms of the KdpD protein, the sensor kinase of the K+-translocating Kdp system of Escherichia coli.
J. Biol. Chem.
271:25027-25034 |
| 226. | Racher, K. I., R. T. Voegele, E. V. Marshall, D. E. Culham, J. M. Wood, H. Jung, M. Bacon, M. T. Cairns, S. M. Ferguson, W.-J. Liang, P. J. F. Henderson, G. White, and F. R. Hallett. Purification and reconstitution of an osmosensor: transporter ProP of Escherichia coli senses and responds to osmotic shifts. Biochemistry, in press. |
| 227. | Rand, R. P., N. L. Fuller, S. M. Gruner, and V. A. Parsegian. 1990. Measured curvature, lipid segregation, and structural transitions for phospholipids under dual-solvent stress. Biochemistry 29:76-87[Medline]. |
| 228. | Record, M. T., Jr., E. S. Courtenay, D. S. Cayley, and H. J. Guttman. 1998. Responses of E. coli to osmotic stress: large changes in amounts of cytoplasmic solutes and water. Trends Biochem. Sci. 23:143-148[Medline]. |
| 229. | Record, M. T., Jr., E. S. Courtenay, S. Cayley, and H. J. Guttman. 1998. Biophysical compensation mechanisms buffering E. coli protein-nucleic acid interactions against changing environments. Trends Biochem. Sci. 23:190-194[Medline]. |
| 230. | Reed, R. H., and A. E. Walsby. 1985. Changes in cell turgor pressure in response to increases in external NaCl concentration in the gas-vacuolate cyanobacterium Microcystis sp. Arch. Microbiol. 143:290. |
| 231. | Reed, R. H., S. R. C. Warr, N. W. Kerby, and W. D. P. Stewart. 1986. Osmotic shock-induced release of low molecular weight metabolites from free-living and immobilized cyanobacteria. Enzyme Microb. Technol. 8:101-104. |
| 232. |
Reid, C., and R. P. Rand.
1997.
Probing protein hydration and conformational states in solution.
Biophys. J.
72:1022-1030 |
| 233. |
Richey, B.,
D. S. Cayley,
M. C. Mossing,
C. Kolka,
C. F. Anderson,
T. C. Farrar, and M. T. Record, Jr.
1987.
Variability of the intracellular ionic environment of Escherichia coli.
J. Biol. Chem.
262:7157-7164 |
| 234. | Robinson, C. R., and S. G. Sligar. 1994. Hydrostatic pressure reverses osmotic pressure effects on the specificity of EcoRI-DNA interactions. Biochemistry 33:3787-3793[Medline]. |
| 235. | Robinson, C. R., and S. G. Sligar. 1995. Hydrostatic and osmotic pressure as tools to study macromolecular recognition. Methods Enzymol. 259:395-426[Medline]. |
| 236. | Roth, W. G., M. P. Leckie, and D. N. Dietzler. 1985. Osmotic stress drastically inhibits active transport of carbohydrates by Escherichia coli. Biochem. Biophys. Res. Commun. 126:434-441[Medline]. |
| 237. | Roth, W. G., S. E. Porter, M. P. Leckie, B. E. Porter, and D. N. Dietzler. 1985. Restoration of cell volume and the reversal of carbohydrate transport and growth inhibition of osmotically upshocked Escherichia coli. Biochem. Biophys. Res. Commun. 126:442-449[Medline]. |
| 238. | Rottenberg, H. 1979. The measurement of membrane potential and pH in cells, organelles, and vesicles. Methods Enzymol. 55:547-569[Medline]. |
| 239. | Royer, C. A. 1995. Application of pressure to biochemical equilibria: the other thermodynamic variable. Methods Enzymol. 259:357-377[Medline]. |
| 240. |
Rudolph, A. S.,
J. H. Crowe, and L. M. Crowe.
1986.
Effects of three stabilizing agents proline, betaine, and trehalose on membrane phospholipids.
Arch. Biochem. Biophys.
245:134-143[Medline].
|
| 241. | Ruffert, S., C. Lambert, H. Peter, V. F. Wendisch, and R. Kramer. 1997. Efflux of compatible solutes in Corynebacterium glutamicum mediated by osmoregulated channel activity. Eur. J. Biochem. 247:572-580[Abstract]. |
| 242. | Russell, N. J. 1993. Lipids of halophilic and halotolerant microorganisms, p. 163-210. In R. H. Vreeland, and L. I. Hochstein (ed.), The biology of halophilic bacteria. CRC Press, Inc., Boca Raton, Fla. |
| 243. | Russell, N. J. 1995. Membranes as a target for stress adaptation. Int. J. Food Microbiol. 28:255-261[Medline]. |
| 244. | Rutkowski, C. A., L. M. Williams, T. H. Haines, and H. A. Cummins. 1991. The elasticity of synthetic phospholipid vesicles obtained by photon correlation spectroscopy. Biochemistry 30:5688-5696[Medline]. |
| 245. | Sackmann, E. 1994. Membrane bending energy concept of vesicle- and cell-shapes and shape-transitions. FEBS Lett. 346:3-16[Medline]. |
| 246. |
Saier, M. H., Jr.
1994.
Computer-aided analyses of transport protein sequences: gleaning evidence concerning function, structure, biogenesis, and evolution.
Microbiol. Rev.
58:71-93 |
| 247. | Sanderson, P. W., L. J. Lis, P. J. Quinn, and W. P. Williams. 1991. The Hofmeister effect in relation to membrane lipid phase stability. Biochim. Biophys. Acta 1067:43-50[Medline]. |
| 248. | Santoro, M. M., Y. Liu, S. M. A. Khan, L.-X. Hou, and D. W. Bolen. 1992. Increased thermal stability of proteins in the presence of naturally occurring osmolytes. Biochemistry 31:5278-5283[Medline]. |
| 249. | Schleyer, M., R. Schmid, and E. P. Bakker. 1993. Transient, specific and extremely rapid release of osmolytes from growing cells of Escherichia coli K-12 exposed to hypoosmotic shock. Arch. Microbiol. 160:424-431[Medline]. |
| 250. | Schlösser, A., A. Hamann, D. Bossemeyer, E. Schneider, and E. P. Bakker. 1993. NAD+ binding to the Escherichia coli K+-uptake protein TrkA and sequence similarity between TrkA and domains of a family of dehydrogenases suggest a role for NAD+ in bacterial transport. Mol. Microbiol. 9:533-543[Medline]. |
| 251. | Schwarz, H., and A. L. Koch. 1995. Phase and electron microscopic observations of osmotically induced wrinkling and the role of endocytic vesicles in the plasmolysis of the Gram-negative cell wall. Microbiology 141:3161-3170[Abstract]. |
| 252. |
Seol, W., and A. J. Shatkin.
1993.
Membrane topology model of Escherichia coli -ketoglutarate permease by PhoA fusion analysis.
J. Bacteriol.
175:565-567 |
| 253. |
Siebers, A., and K. Altendorf.
1989.
Characterization of the phosphorylated intermediate of the K+-translocating Kdp-ATPase from Escherichia coli.
J. Biol. Chem.
264:5831-5838 |
| 254. | Skjerdal, O. T., H. Sletta, S. G. Flenstad, K. D. Josefsen, D. W. Levine, and T. E. Ellingsen. 1995. Changes in cell volume, growth and respiration rate in response to hyperosmotic stress of NaCl, sucrose and glutamic acid in Brevibacterium lactofermentum and Corynebacterium glutamicum. Appl. Microbiol. Biotechnol. 43:1099-1106. |
| 255. | Slauch, J. M., and T. J. Silhavy. 1996. The porin regulon: a paradigm for the two-component regulatory systems, p. 383-417. In E. C. C. Lin, and A. S. Lynch (ed.), Regulation of gene expression in Escherichia coli. Chapman & Hall, New York, N.Y. |
| 256. | Smith, G. M., L. T. Smith, P. N. M. Gerhardt, and R. Ko. 1998. Solute transport enzymes related to stress tolerance in Listeria monocytogenes: a review. J. Food Biochem. 22:269-285. |
| 257. | Somero, G. N. 1992. Adapting to water stress: convergence on common solutions, p. 3-18. In G. N. Somero, C. B. Osmond, and C. L. Bolis (ed.), Water and life: comparative analysis of water relationships at the organismic, cellular and molecular levels. Springer-Verlag KG, Berlin, Germany. |
| 258. | Steponkus, P. L., and D. V. Lynch. 1989. Freeze-thaw-induced destabilization of the plasma membrane and the effects of cold acclimation. J. Bioenerg. Biomembr. 21:21-41[Medline]. |
| 259. | Stimmeling, K. W., J. E. Graham, A. Kaenjak, and B. J. Wilkinson. 1994. Evidence for feedback (trans) regulation of, and two systems for, glycine betaine transport by Staphylococcus aureus. Microbiology 140:3139-3144[Abstract]. |
| 260. |
Stock, J. B.,
B. Rauch, and S. Roseman.
1977.
Periplasmic space in Salmonella typhimurium and Escherichia coli.
J. Biol. Chem.
252:7850-7861 |
| 261. |
Strange, K.
1994.
Are all cell volume changes the same?
News Physiol. Sci.
9:223-228.
|
| 262. | Stumpe, S., and E. P. Bakker. 1997. Requirement of a large K+-uptake capacity and of extracytoplasmic protease activity for protamine resistance of Escherichia coli. Arch. Microbiol. 167:126-136. |
| 263. | Stumpe, S., A. Schlösser, M. Schleyer, and E. P. Bakker. 1996. K+ circulation across the prokaryotic cell membrane: K+-uptake systems, p. 473-499. In W. N. Konings, H. R. Kaback, and J. S. Lolkema (ed.), Transport processes in eukaryotic and prokaryotic organisms. Elsevier Science B.V., Amsterdam, The Netherlands. |
| 264. |
Styrvold, O. B.,
P. Falkenberg,
B. Landfald,
M. W. Eshoo,
T. Bjornsen, and A. R. Strom.
1986.
Selection, mapping, and characterization of osmoregulatory mutants of Escherichia coli blocked in the choline-glycine betaine pathway.
J. Bacteriol.
165:856-863 |
| 265. |
Styrvold, O. B., and A. R. Strom.
1991.
Synthesis, accumulation, and excretion of trehalose in osmotically stressed Escherichia coli K-12 strains: influence of amber suppressors and function of the periplasmic trehalase.
J. Bacteriol.
173:1187-1192 |
| 266. | Sugiura, A., K. Hirokawa, K. Nakashima, and T. Mizuno. 1994. Signal-sensing mechanisms of the putative osmosensor KdpD in Escherichia coli. Mol. Microbiol. 14:929-938[Medline]. |
| 267. | Sugiura, A., K. Nakashima, K. Tanaka, and T. Mizuno. 1992. Clarification of the structural and functional features of the osmoregulated kdp operon of Escherichia coli. Mol. Microbiol. 6:1769-1776[Medline]. |
| 268. | Sukharev, S. I., P. Blount, B. Martinac, and C. Kung. 1997. Mechanosensitive channels of Escherichia coli: the MscL gene, protein, and activities. Annu. Rev. Physiol. 59:633-657[Medline]. |
| 269. |
Sutherland, L.,
J. Cairney,
M. J. Elmore,
I. R. Booth, and C. F. Higgins.
1986.
Osmotic regulation of transcription: induction of the proU betaine transport gene is dependent on accumulation of intracellular potassium.
J. Bacteriol.
168:805-814 |
| 270. | Sutton, G. C., P. J. Quinn, and N. J. Russell. 1990. Changes in phospholipid composition of bacterial membranes prevent formation of non-bilayer phases in vitro and in vivo by high solute concentrations. Biochem. Soc. Trans. 18:950[Medline]. |
| 271. | Sutton, G. C., N. J. Russell, and P. J. Quinn. 1991. The effect of salinity on the phase behaviour of total lipid extracts and binary mixtures of the major phospholipids isolated from a moderately halophilic eubacterium. Biochim. Biophys. Acta 1061:235-246[Medline]. |
| 272. |
Sweeney, T. E., and C. A. Beuchat.
1993.
Limitations of methods of osmometry: measuring the osmolality of biological fluids.
Am. J. Physiol.
264:R469-R480 |
| 273. | Taiz, L. 1984. Plant cell expansion: regulation of cell wall mechanical properties. Annu. Rev. Plant Physiol. 35:585-657. |
| 274. | Thwaites, J. J., and N. H. Mendelson. 1991. Mechanical behaviour of bacterial cell walls. Adv. Microb. Physiol. 32:174-221. |
| 275. | Timasheff, S. N. 1993. The control of protein stability and association by weak interactions with water: how do solvents affect these processes? Annu. Rev. Biophys. Biomol. Struct. 22:67-97[Medline]. |
| 276. | Timasheff, S. N. 1994. Preferential interactions of water and cosolvents with proteins, p. 445-482. In R. B. Gregory (ed.), Protein-solvent interactions. Marcel Dekker, Inc., New York, N.Y. |
| 277. |
Tokishita, S.,
H. Yamada,
H. Aiba, and T. Mizuno.
1990.
Transmembrane signal transduction and osmoregulation in Escherichia coli. II. The osmotic sensor, EnvZ, located in the isolated cytoplasmic membrane displays its phosphorylation and dephosphorylation abilities as to the activator protein, OmpR.
J. Biochem.
108:488-493 |
| 278. |
Treuner-Lange, A.,
A. Kuhn, and P. Dürre.
1997.
The kdp system of Clostridium acetobutylicum: cloning, sequencing, and transcriptional regulation in response to potassium concentration.
J. Bacteriol.
179:4501-4512 |
| 278a. | Tripet, B., and R. S. Hodges. Personal communication. |
| 279. | Tsapis, A., and A. Kepes. 1977. Transient breakdown of the permeability barrier of the membrane of Escherichia coli upon hypoosmotic shock. Biochim. Biophys. Acta 469:1-12[Medline]. |
| 280. | Tschichholz, I., and H. G. Trüper. 1990. Fate of compatible solutes during dilution stress in Ectothiorhodospira halochloris. FEMS Microbiol. Ecol. 73:181-186. |
| 281. |
Valkenburg, J. A. C., and C. Woldringh.
1984.
Phase separation between nucleoid and cytoplasm in Escherichia coli as defined by immersive refractometry.
J. Bacteriol.
160:1151-1157 |
| 282. | Van Zanten, J. H. 1996. Characterization of vesicles and vesicular dispersions via scattering techniques, p. 239-294. In M. Rosoff (ed.), Vesicles. Marcel Dekker, Inc., New York, N.Y. |
| 283. |
Verheul, A.,
E. Glaasker,
B. Poolman, and T. Abee.
1997.
Betaine and L-carnitine transport by Listeria monocytogenes Scott A in response to osmotic signals.
J. Bacteriol.
179:6979-6985 |
| 284. |
Verkman, A. S.,
A. N. van Hoek,
T. Ma,
A. Frigeri,
W. R. Skach,
A. Mitra,
B. K. Tamarappoo, and J. Farinas.
1996.
Water transport across mammalian cell membranes.
Am. J. Physiol.
270:C12-C30 |
| 285. | Vijaranakul, U., M. J. Nadakavukaren, D. O. Bayles, B. J. Wilkinson, and R. K. Jayaswal. 1997. Characterization of an NaCl-sensitive Staphylococcus aureus mutant and rescue of the NaCl-sensitive phenotype by glycine betaine but not by other compatible solutes. Appl. Environ. Microbiol. 63:1889-1897[Abstract]. |
| 286. | Voelkner, P., W. Puppe, and K. Altendorf. 1993. Characterization of KdpD protein, the sensor kinase of the K+-translocating Kdp system of Escherichia coli. Eur. J. Biochem. 217:1019-1026[Abstract]. |
| 287. | von Blohn, C., B. Kempf, R. M. Kappes, and E. Bremer. 1997. Osmostress response in Bacillus subtilis: characterization of a proline uptake system (OpuE) regulated by high osmolarity and the alternative transcription factor sigma B. Mol. Microbiol. 25:175-187[Medline]. |
| 288. | Vreeland, R. H., B. D. Mierau, C. D. Litchfield, and E. L. Martin. 1983. Relationship of the internal solute composition to the salt tolerance of Halomonas elongata. Can. J. Microbiol. 29:407-414. |
| 289. |
Walderhaug, M. O.,
E. D. Litwack, and W. Epstein.
1989.
Wide distribution of homologs of Escherichia coli Kdp K+-ATPase among gram-negative bacteria.
J. Bacteriol.
171:1192-1195 |
| 290. | Walsby, A. E. 1986. The pressure relationships of halophilic and non-halophilic prokaryotic cells determined by using gas vesicles as pressure probes. FEMS Microbiol. Rev. 39:45-49. |
| 291. | Walter, H., and D. E. Brooks. 1995. Phase separation in cytoplasm, due to macromolecular crowding, is the basis for microcompartmentation. FEBS Lett. 361:135-139[Medline]. |
| 292. | Wang, A. J., and D. W. Bolen. 1997. A naturally occurring protective system in urea-rich cells: mechanism of osmolyte protection of proteins against urea denaturation. Biochemistry 36:9101-9108[Medline]. |
| 293. | Welsh, D. T., R. H. Reed, and R. A. Herbert. 1991. The role of trehalose in the osmoadaptation of Escherichia coli NCIB 9484: interaction of trehalose, K+ and glutamate during osmoadaptation in continuous culture. J. Gen. Microbiol. 137:745-750[Medline]. |
| 294. | Whatmore, A. M., and R. H. Reed. 1990. Determination of turgor pressure in Bacillus subtilis: a possible role for K+ in turgor regulation. J. Gen. Microbiol. 136:2521-2526[Medline]. |
| 295. |
Wiggins, P. M.
1990.
Role of water in some biological processes.
Microbiol. Rev.
54:432-449 |
| 296. | Wiggins, P. M. 1995. High and low density water in gels. Prog. Polym. Sci. 20:1121-1163. |
| 297. | Winzor, D. J., and P. R. Wills. 1994. Thermodynamic nonideality and protein solvation, p. 483-520. In R. B. Gregory (ed.), Protein-solvent interactions. Marcel Dekker, Inc., New York, N.Y. |
| 298. | Woldringh, C. 1994. Significance of plasmolysis spaces as markers for periseptal annuli and adhesion sites. Mol. Microbiol. 14:597-607[Medline]. |
| 299. | Woldringh, C., P. R. Jensen, and H. V. Westerhoff. 1995. Structure and partitioning of bacterial DNA: determined by a balance of compaction and expansion forces? FEMS Microbiol. Lett. 131:235-242[Medline]. |
| 300. |
Wong, L. S.,
M. S. Johnson,
L. B. Sandberg, and B. L. Taylor.
1995.
Amino acid efflux in response to chemotactic and osmotic signals in Bacillus subtilis.
J. Bacteriol.
177:4342-4349 |
| 301. | Xie, G. F., and S. N. Timasheff. 1997. The thermodynamic mechanism of protein stabilization by trehalose. Biophys. Chem. 64:25-43[Medline]. |
| 302. |
Xu, J., and R. C. Johnson.
1997.
Cyclic AMP receptor protein functions as a repressor of the osmotically inducible promoter proP P1 in Escherichia coli.
J. Bacteriol.
179:2410-2417 |
| 303. |
Yan, D. L.,
T. P. Ikeda,
A. E. Shauger, and S. Kustu.
1996.
Glutamate is required to maintain the steady-state potassium pool in Salmonella typhimurium.
Proc. Natl. Acad. Sci. USA
93:6527-6531 |
| 304. | Yancey, P. H. 1992. Compatible and counteracting aspects of organic osmolytes in mammalian kidney cells in vivo and in vitro, p. 19-32. In G. N. Somero, C. B. Osmond, and C. L. Bolis (ed.), Water and life: comparative analysis of water relationships at the organismic, cellular and molecular levels. Springer-Verlag KG, Berlin, Germany. |
| 305. | Ye, R., and A. S. Verkman. 1989. Simultaneous optical measurement of osmotic and diffusional water permeability in cells and liposomes. Biochemistry 28:824-829[Medline]. |
| 306. |
Yim, H.,
R. Brems, and M. Villarejo.
1994.
Molecular characterization of the promoter of osmY, an rpoS-dependent gene.
J. Bacteriol.
176:100-107 |
| 307. | Zeuthen, T. 1995. Molecular mechanisms for passive and active transport of water. Int. Rev. Cytol. 160:99-160[Medline]. |
| 308. | Zhang, W., M. W. Capp, J. P. Bond, C. F. Anderson, and M. T. Record, Jr. 1996. Thermodynamic characterization of interactions of native bovine serum albumin with highly excluded (glycine betaine) and moderately accumulated (urea) solutes by a novel application of vapour pressure osmometry. Biochemistry 35:10506-10516[Medline]. |
| 309. | Zhu, J.-K., J. Shi, U. Singh, S. E. Wyatt, R. A. Bressan, P. M. Hasegawa, and N. C. Carpita. 1993. Enrichment of vitronectin- and fibronectin-like proteins in NaCl-adapted plant cells and evidence for their involvement in plasma membrane-cell wall adhesion. Plant J. 3:637-646. |
| 310. |
Zimmann, P.,
W. Puppe, and K. Altendorf.
1995.
Membrane topology analysis of the sensor kinase KdpD of Escherichia coli.
J. Biol. Chem.
270:28282-28288 |
| 311. | Zimmerman, S. B., and A. P. Minton. 1993. Macromolecular crowding: biochemical, biophysical and physiological consequences. Annu. Rev. Biophys. Biomol. Struct. 22:27-65[Medline]. |
| 312. | Zimmerman, S. B., and L. D. Murphy. 1996. Macromolecular crowding and the mandatory condensation of DNA in bacteria. FEBS Lett. 390:245-248[Medline]. |
| 313. | Zimmerman, S. B., and S. O. Trach. 1991. Estimation of macromolecule concentrations and excluded volume effects for the cytoplasm of Escherichia coli. J. Mol. Biol. 222:599-620[Medline]. |
This article has been cited by other articles:
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Copyright © 2010 by the American Society for Microbiology. For an alternate route to Journals.ASM.org, visit: http://intl-journals.asm.org | More Info»