Table 4.

Palindromic sequences present in regions upstream of respiratory genes

Palindrome (consensus)SequencePromoterDistance relative to:
Transcriptional startaTranslational start
ACG...CGTACGG.CCGT fbc −2252
ACG...CGT etf NNb 90
T.GCA.....TGC.AT.GCAGC.GCTGC.A nqo NN125
TCGCA.....TGCGA ccoN NN45
TCGCA.....TGCCC nap NN11
T.GCAA...TTGC.G ccoN NN192
TCGC...GCGATCGCA.TGCGA ctaDII NN82
TCGCC.TGCGA cycA  81133
TCGCA.GGCGA qox  4498
TCGCT.ACCGA qox −3420
TGCC.GGCATGCT.GGCA ccoG NN79
TGCC.GGCA ccoG NN174
TGCC.GGCA qox 129183
CCTGC.....GCAGGCCTGCCG.CGGCATG ctaC NN25
CCTGC.....GCAGG ccoN NN207
ATC....GATATCCCGGTAT ctaDI NN42
ATCCCGAGAT ccoG NN272
ATTCCGGGAT ccoN NN151
ATCG..CGAT nap NN294
ATC.GC.GAT cycM NN5
ATC.GC.GAT sdh −5128
TGC......GCATGCG....CGCA nap NN124
TGCG....CGCA ccoG NN46
TGC.TTAG.GCA fbc 126200
TGC.A..T.GCA qox   559
  • a Minus sign indicates that it is located downstream.

  • b NN, not known.