Table 3.

Nucleotide and amino acid identity between genes common to H. pylori J99 and 26695

% IdentityNo. (%) of predicted ORFsa
NucleotideAmino acid
1000 (0)41 (2.9)
98.0–99.98 (0.6)269 (19.3)
96.0–97.9249 (17.8)359 (25.7)
94.0–95.9566 (40.5)279 (20.0)
92.0–93.9306 (21.9)169 (12.1)
90.0–91.989 (6.4)86 (6.2)
85.0–89.981 (5.8)77 (5.5)
<8597 (7.0)116 (8.3)
Total1,396 (100)1,396 (100)
  • a Genes that appear “split” by putative frameshifts in either strain have been classed as the larger ORF in the above analysis.