TABLE 19.

Base excision repair genes

S. cerevisiae geneFunctionNeurospora NCU no.ContigE valueBest match to Neurospora protein in SP + TrEMBLE value (BLASTP)
APN1AP endonuclease10044.13.7482e-78S. cerevisiae Apn1p9e-81
Plasmodium Apn15e-69
MAG13-Methyladenine DNA glycosylase08938.13.5596e-21O. sativa Mag1 homologue1e-18
Halobacterium Mag1 homologue7e-18
S. cerevisiae Mag1p6e-12
NTG1DNA N-glycosylase06654.13.3852e-44S. pombe Nth15e-62
Drosophila Nth1 homologue6e-57
Human NTH12e-50
OGG18-Oxo-guanine DNA glycosylase03040.13.1543e-33Rat OGG13e-39
M. musculus OGG12e-38
Human OGG16e-38
S. cerevisiae Ogg1p3e-31
UNG1Uracil N-glycosylase07482.13.4394e-65S. pombe Ung11e-86
S. cerevisiae Ung1p5e-68
Human UNG1e-52
Human PARP-1Poly(ADP-ribose) polymerase activity, protein modification08852.13.5502e-63A. thaliana app8e-66
Dictyostelium ADPRT22e-62
Human ADPRT4e-60