TABLE 20.

RAD6 DNA repair genes

S. cerevisiae geneFunctionNeurospora homologueContigE valueBest match to Neurospora protein in SP + TrEMBLE value (BLASTP)
RAD5RING finger protein, DNA helicaseNCU09516.1 mus-413.611e-120S. pombe Rad80.0
S. cerevisiae Rad5e-143
Human HIP1169e-76
RAD6Ubiquitin-conjugating enzyme, required for histone ubiquitination, protein monoubiquitination, and ubiquitin-dependent protein catabolismNCU09731.1 mus-83.6347e-67N. haematococca NhRAD66e-83
E. nidulans UVSJ5e-80
S. pombe Rhp62e-70
S. cerevisiae Rad65e-69
Human HHR6B4e-61
Human HHR6A2e-60
RAD18RING finger protein, ATPase activity, single-stranded DNA binding activityNCU05210.1 uvs-23.2937e-31E. nidulans NUVA1e-74
S. pombe Rhp183e-40
S. cerevisiae Rad184e-29
Human hRAD188e-27
UBC13Ubiquitin-conjugating enzyme, heterodimer with Mms2NCU02113.13.959e-63Catharanthus CrUBIE22e-62
A. thaliana AY0492613e-62
S. cerevisiae Ubc133e-61
S. pombe Spu133e-60
Human UBE2N4e-60
MMS2Ubiquitin-conjugating enzyme, heterodimer with Ubc13No numberExcluded contig 3.72K. delphensis MMS22e-39
S. pombe Spm21e-37
S. cerevisiae Mms22e-35
Human hMMS24e-34
Human CROC-1B4e-34