Distribution of Cu-related gene orthologs in marine picocyanobacterial genomes

Genus and strain (clade)Presencea of:
petE, cluster 1274cueO, cluster 2933 or 3002ctaA, cluster 65pacS, cluster 9116atx1bCd/Co/Hg/Pb/Zn-translocating P-type ATPase, cluster 9115 or 9117
    CC9311 (I)
    CC9605 (II)
    WH8102 (III)
    CC9902 (IV)
    BL107 (IV)
    WH7803 (V)• (2)
    WH7805 (VI)
    RS9917 (VIII)
    RS9916 (IX)
    WH5701 (5.2)
    RCC307 (5.3)
Synechocystis sp. strain PCC6803
    MED4 (HLI)
    MIT9515 (HLI)
    AS9601 (HLII)
    MIT9215 (HLII)
    MIT9301 (HLII)
    MIT9312 (HLII)
    NATL1A (LLI)
    NATL2A (LLI)
    SS120 (LLII)
    MIT9211 (LLIII)
    MIT9303 (LLIV)
    MIT9313 (LLIV)
  • a The presence of a single gene is indicated by a closed circle. Where multiple genes are present, the number is given. −, absent.

  • b Searches for Atx1 using BLASTP and TBLASTN gave TBLASTN E values in marine Synechococcus and Prochlorococcus strains of >0.4, so Atx1 is either absent or looks completely different from ssr2857 of Synechocystis sp. strain PCC6803.